Orthologous regulated operons containing ribD gene
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactococcus lactis subsp. lactis Il1403 | ||||
|
Position: -298
Score: 118.78 Sequence: TAAATCTTCAGGGCA...
Locus tag: L0163
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: L0164
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: L0165
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: L0166
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -298 | 118.8 | TAAATCTTCAGGGCA... | L0163 |
| Streptococcus agalactiae 2603V/R | ||||
|
Position: -307
Score: 108.7 Sequence: AATTTCTTCGGGGTC...
Locus tag: SAG0746
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SAG0747
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SAG0748
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SAG0749
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -307 | 108.7 | AATTTCTTCGGGGTC... | SAG0746 |
| Streptococcus gallolyticus UCN34 | ||||
|
Position: -365
Score: 52.21 Sequence: TATGTCTGCGAGGTG...
Locus tag: GALLO_0692
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: GALLO_0693
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: GALLO_0694
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: GALLO_0695
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -365 | 52.2 | TATGTCTGCGAGGTG... | GALLO_0692 |
| Streptococcus pneumoniae TIGR4 | ||||
|
Position: -249
Score: 123.67 Sequence: TAACTATCTTCAGGG...
Locus tag: SP_0178
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SP_0177
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SP_0176
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SP_0175
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -249 | 123.7 | TAACTATCTTCAGGG... | SP_0178 |