Orthologous regulated operons containing rpmI gene
| Regulator type: | RNA regulatory element |
| Name: | L20_leader |
| RFAM: | RF00558 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactococcus lactis subsp. cremoris SK11 | ||||
|
Position: -58
Score: 81.67 Sequence: AGTTGAAAAGCAGAA...
Locus tag: LACR_2033
Name: infC Funciton: Translation initiation factor 3
Locus tag: LACR_2032
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: LACR_2031
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -58 | 81.7 | AGTTGAAAAGCAGAA... | LACR_2033 |
| Lactococcus lactis subsp. lactis Il1403 | ||||
|
Position: -213
Score: 80.31 Sequence: AGTTGAAAAGCAGAA...
Locus tag: L95240
Name: infC Funciton: Translation initiation factor 3
Locus tag: L0430
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: L0416
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -213 | 80.3 | AGTTGAAAAGCAGAA... | L95240 |
| Streptococcus agalactiae 2603V/R | ||||
|
Position: -141
Score: 83.74 Sequence: ATGAGAAAAGCAGAA...
Locus tag: SAG1384
Name: infC Funciton: Translation initiation factor 3
Locus tag: SAG1383
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SAG1382
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -141 | 83.7 | ATGAGAAAAGCAGAA... | SAG1384 |
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||||
|
Position: -137
Score: 77.6 Sequence: GAGAAAAGCAGAAGT...
Locus tag: SDEG_0770
Name: infC Funciton: Translation initiation factor 3
Locus tag: SDEG_0771
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SDEG_0772
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -137 | 77.6 | GAGAAAAGCAGAAGT... | SDEG_0770 |
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||||
|
Position: -136
Score: 72.03 Sequence: GAGAAAAGCAGAAGT...
Locus tag: Sez_0857
Name: infC Funciton: Translation initiation factor 3
Locus tag: Sez_0858
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: Sez_0859
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -136 | 72 | GAGAAAAGCAGAAGT... | Sez_0857 |
| Streptococcus gallolyticus UCN34 | ||||
|
Position: -143
Score: 74.07 Sequence: ATGAGAAAAGCAGAA...
Locus tag: GALLO_1361
Name: infC Funciton: Translation initiation factor 3
Locus tag: GALLO_1360
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: GALLO_1359
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -143 | 74.1 | ATGAGAAAAGCAGAA... | GALLO_1361 |
| Streptococcus gordonii str. Challis substr. CH1 | ||||
|
Position: -244
Score: 76.9 Sequence: GAGAAAAGCAGAAGT...
Locus tag: SGO_1032
Name: infC Funciton: Translation initiation factor 3
Locus tag: SGO_1033
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SGO_1034
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -244 | 76.9 | GAGAAAAGCAGAAGT... | SGO_1032 |
| Streptococcus mitis B6 | ||||
|
Position: -119
Score: 66.63 Sequence: GAGAAAAGCAGAAGT...
Locus tag: smi_0959
Name: infC Funciton: Translation initiation factor 3
Locus tag: smi_0960
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: smi_0961
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -119 | 66.6 | GAGAAAAGCAGAAGT... | smi_0959 |
| Streptococcus mutans UA159 | ||||
|
Position: -142
Score: 77.57 Sequence: GAGAAAAGCAGAAGT...
Locus tag: SMU.697
Name: infC Funciton: Translation initiation factor 3
Locus tag: SMU.698
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SMU.699
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -142 | 77.6 | GAGAAAAGCAGAAGT... | SMU.697 |
| Streptococcus pneumoniae TIGR4 | ||||
|
Position: -119
Score: 71.82 Sequence: GAGAAAAGCAGAAGT...
Locus tag: SP_0959
Name: infC Funciton: Translation initiation factor 3
Locus tag: SP_0960
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SP_0961
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -119 | 71.8 | GAGAAAAGCAGAAGT... | SP_0959 |
| Streptococcus pyogenes M1 GAS | ||||
|
Position: -137
Score: 77.82 Sequence: GAGAAAAGTAGAAGT...
Locus tag: SPy0804
Name: infC Funciton: Translation initiation factor 3
Locus tag: SPy0805
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SPy0806
Name: rplT Funciton: LSU ribosomal protein L20p |
||||
| infC-rpmI-rplT | -137 | 77.8 | GAGAAAAGTAGAAGT... | SPy0804 |
| Streptococcus sanguinis SK36 | ||||
|
Position: -148
Score: 75.97 Sequence: TTGAGAAAAGCAGAA...
Locus tag: SSA_1500
Name: infC Funciton: Translation initiation factor 3
Locus tag: SSA_1499
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SSA_1498
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -148 | 76 | TTGAGAAAAGCAGAA... | SSA_1500 |
| Streptococcus suis 05ZYH33 | ||||
|
Position: -170
Score: 66.7 Sequence: TTGAGAAAAGCAGAA...
Locus tag: SSU05_1270
Name: infC Funciton: Translation initiation factor 3
Locus tag: SSU05_1269
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SSU05_1268
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -170 | 66.7 | TTGAGAAAAGCAGAA... | SSU05_1270 |
| Streptococcus thermophilus CNRZ1066 | ||||
|
Position: -137
Score: 77.32 Sequence: ATGAGAAAAGCAGAA...
Locus tag: str1134
Name: infC Funciton: Translation initiation factor 3
Locus tag: str1133
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: str1132
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -137 | 77.3 | ATGAGAAAAGCAGAA... | str1134 |
| Streptococcus uberis 0140J | ||||
|
Position: -138
Score: 79.79 Sequence: GAGAAAAGTAGAAGT...
Locus tag: SUB0711
Name: infC Funciton: Translation initiation factor 3
Locus tag: SUB0712
Name: rpmI Funciton: LSU ribosomal protein L35p
Locus tag: SUB0713
Name: rplT Funciton: LSU ribosomal protein L20p |
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| infC-rpmI-rplT | -138 | 79.8 | GAGAAAAGTAGAAGT... | SUB0711 |