Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsI gene

Properties
Regulator type: RNA regulatory element
Name: L13_leader
RFAM: RF00555
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -69
Score: 46.64
Sequence: GTATGTTTGTCCACG...
Locus tag: LBA0323
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LBA0324
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -69 46.6 GTATGTTTGTCCACG... LBA0323
Lactobacillus brevis ATCC 367
Position: -78
Score: 40.2
Sequence: TGGTATTGTTTGCCC...
Locus tag: LVIS_1658
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LVIS_1657
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -78 40.2 TGGTATTGTTTGCCC... LVIS_1658
Lactobacillus casei ATCC 334
Position: -77
Score: 59.59
Sequence: TGGTATTGTTTGCCC...
Locus tag: LSEI_2463
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSEI_2462
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -77 59.6 TGGTATTGTTTGCCC... LSEI_2463
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -121
Score: 43.62
Sequence: GTATGTTTGTCCACG...
Locus tag: LBUL_0382
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LBUL_0383
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -121 43.6 GTATGTTTGTCCACG... LBUL_0382
Lactobacillus helveticus DPC 4571
Position: -69
Score: 46.64
Sequence: GTATGTTTGTCCACG...
Locus tag: lhv_0343
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: lhv_0344
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -69 46.6 GTATGTTTGTCCACG... lhv_0343
Lactobacillus johnsonii NCC 533
Position: -70
Score: 45.75
Sequence: GTATGTTTGTCCACG...
Locus tag: LJ0367
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LJ0368
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -70 45.8 GTATGTTTGTCCACG... LJ0367
Lactobacillus plantarum WCFS1
Position: -75
Score: 58.14
Sequence: GTATTGTTTGCCCCA...
Locus tag: lp_1077
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: lp_1078
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -75 58.1 GTATTGTTTGCCCCA... lp_1077
Lactobacillus reuteri JCM 1112
Position: -74
Score: 19.94
Sequence: TGGTATTTCTTTTCC...
Locus tag: LAR_1362
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LAR_1361
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -74 19.9 TGGTATTTCTTTTCC... LAR_1362
Lactobacillus rhamnosus GG
Position: -77
Score: 59.59
Sequence: TGGTATTGTTTGCCC...
Locus tag: LGG_02448
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LGG_02447
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -77 59.6 TGGTATTGTTTGCCC... LGG_02448
Lactobacillus sakei subsp. sakei 23K
Position: -77
Score: 61.38
Sequence: TGGTATTGTTTGCCC...
Locus tag: LSA1722
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSA1721
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -77 61.4 TGGTATTGTTTGCCC... LSA1722
Lactobacillus salivarius subsp. salivarius UCC118
Position: -79
Score: 46.85
Sequence: TGGTATTGTTTGCCC...
Locus tag: LSL_1403
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSL_1402
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -79 46.8 TGGTATTGTTTGCCC... LSL_1403
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Position: -95
Score: 55.2
Sequence: GTATTGTTTACCTCA...
Locus tag: LEUM_0230
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LEUM_0231
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -95 55.2 GTATTGTTTACCTCA... LEUM_0230
Pediococcus pentosaceus ATCC 25745
Position: -82
Score: 47.74
Sequence: TGGTATTGTTTACCT...
Locus tag: PEPE_1386
Name: rplM
Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: PEPE_1385
Name: rpsI
Funciton: SSU ribosomal protein S9p (S16e)
rplM-rpsI -82 47.7 TGGTATTGTTTACCT... PEPE_1386
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