Orthologous regulated operons containing rpsI gene
| Regulator type: | RNA regulatory element |
| Name: | L13_leader |
| RFAM: | RF00555 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Lactobacillus acidophilus NCFM | ||||
|
Position: -69
Score: 46.64 Sequence: GTATGTTTGTCCACG...
Locus tag: LBA0323
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LBA0324
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -69 | 46.6 | GTATGTTTGTCCACG... | LBA0323 |
| Lactobacillus brevis ATCC 367 | ||||
|
Position: -78
Score: 40.2 Sequence: TGGTATTGTTTGCCC...
Locus tag: LVIS_1658
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LVIS_1657
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -78 | 40.2 | TGGTATTGTTTGCCC... | LVIS_1658 |
| Lactobacillus casei ATCC 334 | ||||
|
Position: -77
Score: 59.59 Sequence: TGGTATTGTTTGCCC...
Locus tag: LSEI_2463
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSEI_2462
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -77 | 59.6 | TGGTATTGTTTGCCC... | LSEI_2463 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||||
|
Position: -121
Score: 43.62 Sequence: GTATGTTTGTCCACG...
Locus tag: LBUL_0382
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LBUL_0383
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -121 | 43.6 | GTATGTTTGTCCACG... | LBUL_0382 |
| Lactobacillus helveticus DPC 4571 | ||||
|
Position: -69
Score: 46.64 Sequence: GTATGTTTGTCCACG...
Locus tag: lhv_0343
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: lhv_0344
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -69 | 46.6 | GTATGTTTGTCCACG... | lhv_0343 |
| Lactobacillus johnsonii NCC 533 | ||||
|
Position: -70
Score: 45.75 Sequence: GTATGTTTGTCCACG...
Locus tag: LJ0367
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LJ0368
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -70 | 45.8 | GTATGTTTGTCCACG... | LJ0367 |
| Lactobacillus plantarum WCFS1 | ||||
|
Position: -75
Score: 58.14 Sequence: GTATTGTTTGCCCCA...
Locus tag: lp_1077
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: lp_1078
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -75 | 58.1 | GTATTGTTTGCCCCA... | lp_1077 |
| Lactobacillus reuteri JCM 1112 | ||||
|
Position: -74
Score: 19.94 Sequence: TGGTATTTCTTTTCC...
Locus tag: LAR_1362
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LAR_1361
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -74 | 19.9 | TGGTATTTCTTTTCC... | LAR_1362 |
| Lactobacillus rhamnosus GG | ||||
|
Position: -77
Score: 59.59 Sequence: TGGTATTGTTTGCCC...
Locus tag: LGG_02448
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LGG_02447
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -77 | 59.6 | TGGTATTGTTTGCCC... | LGG_02448 |
| Lactobacillus sakei subsp. sakei 23K | ||||
|
Position: -77
Score: 61.38 Sequence: TGGTATTGTTTGCCC...
Locus tag: LSA1722
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSA1721
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -77 | 61.4 | TGGTATTGTTTGCCC... | LSA1722 |
| Lactobacillus salivarius subsp. salivarius UCC118 | ||||
|
Position: -79
Score: 46.85 Sequence: TGGTATTGTTTGCCC...
Locus tag: LSL_1403
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LSL_1402
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -79 | 46.8 | TGGTATTGTTTGCCC... | LSL_1403 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||||
|
Position: -95
Score: 55.2 Sequence: GTATTGTTTACCTCA...
Locus tag: LEUM_0230
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: LEUM_0231
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -95 | 55.2 | GTATTGTTTACCTCA... | LEUM_0230 |
| Pediococcus pentosaceus ATCC 25745 | ||||
|
Position: -82
Score: 47.74 Sequence: TGGTATTGTTTACCT...
Locus tag: PEPE_1386
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: PEPE_1385
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplM-rpsI | -82 | 47.7 | TGGTATTGTTTACCT... | PEPE_1386 |