Orthologous regulated operons containing pyrF gene

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Phylum:	Actinobacteria

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Corynebacterium aurimucosum ATCC 700975
Position: -43 Score: 20.5 Sequence: CATCCTTTAAAGACC... Locus tag: cauri_1175 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: cauri_1176 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: cauri_1177 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: cauri_1178 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: cauri_1179 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: cauri_1180 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	-43	20.5	CATCCTTTAAAGACC...	cauri_1175
Corynebacterium diphtheriae NCTC 13129
Position: -46 Score: 23.57 Sequence: GGCATCCTTTAACAG... Locus tag: DIP1335 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: DIP1334 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: DIP1333 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: DIP1332 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: DIP1331 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: DIP1330 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	-46	23.6	GGCATCCTTTAACAG...	DIP1335
Corynebacterium efficiens YS-314
Position: -46 Score: 19.2 Sequence: GACATCCTTTAACGG... Locus tag: CE1733 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: CE1732 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: CE1731 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: CE1730 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: CE1729 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: CE1728 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	-46	19.2	GACATCCTTTAACGG...	CE1733
Corynebacterium glutamicum ATCC 13032
Position: 11 Score: 20.92 Sequence: GACATCCTTTAACGG... Locus tag: cg1817 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: cg1816 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: cg1815 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: cg1814 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: cg1813 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: cg1812 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	11	20.9	GACATCCTTTAACGG...	cg1817
Corynebacterium jeikeium K411
Position: -46 Score: 20.3 Sequence: GACATCCTTTAACGG... Locus tag: jk1026 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: jk1025 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: jk1024 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: jk1023 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: jk1022 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: jk1021 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	-46	20.3	GACATCCTTTAACGG...	jk1026
Corynebacterium kroppenstedtii DSM 44385
Position: -46 Score: 18.62 Sequence: GACATCCTTTAACGG... Locus tag: ckrop_0993 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR Locus tag: ckrop_3001 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: ckrop_0992 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: ckrop_0991 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: ckrop_0990 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: ckrop_0989 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-carA-carB-pyrF	-46	18.6	GACATCCTTTAACGG...	ckrop_0993