Orthologous regulated operons containing rpsO gene
| Regulator type: | RNA regulatory element |
| Name: | S15 |
| RFAM: | RF00114 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -56
Score: 102.35 Sequence: TTCTTGGCTGAGTTA...
Locus tag: Sama_0964
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 102.3 | TTCTTGGCTGAGTTA... | Sama_0964 |
| Shewanella baltica OS155 | ||||
|
Position: -58
Score: 96.52 Sequence: GCCCTCTGGCTGAGT...
Locus tag: Sbal_3236
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -58 | 96.5 | GCCCTCTGGCTGAGT... | Sbal_3236 |
| Shewanella denitrificans OS217 | ||||
|
Position: -57
Score: 103.08 Sequence: CCTCTGGCTGAGTTA...
Locus tag: Sden_1010
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -57 | 103.1 | CCTCTGGCTGAGTTA... | Sden_1010 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -56
Score: 96.24 Sequence: ACTCTGGCTGAGTTA...
Locus tag: Sfri_0993
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 96.2 | ACTCTGGCTGAGTTA... | Sfri_0993 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -60
Score: 100.73 Sequence: CCCCTTTGGCTGAGT...
Locus tag: Shal_3144
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -60 | 100.7 | CCCCTTTGGCTGAGT... | Shal_3144 |
| Shewanella loihica PV-4 | ||||
|
Position: -56
Score: 99.15 Sequence: TCTCTTTGGCTGAGT...
Locus tag: Shew_2824
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 99.2 | TCTCTTTGGCTGAGT... | Shew_2824 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -56
Score: 98.61 Sequence: CCTCTGGCTGAGTTA...
Locus tag: SO_1207
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 98.6 | CCTCTGGCTGAGTTA... | SO_1207 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -61
Score: 99.6 Sequence: CCCCTTTGGCTGAGT...
Locus tag: Spea_3057
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -61 | 99.6 | CCCCTTTGGCTGAGT... | Spea_3057 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -57
Score: 102.32 Sequence: ACTTTGGCTGAGTTA...
Locus tag: swp_1221
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -57 | 102.3 | ACTTTGGCTGAGTTA... | swp_1221 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -58
Score: 98.25 Sequence: GCCCTCTGGCTGAGT...
Locus tag: Sputcn32_2831
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -58 | 98.2 | GCCCTCTGGCTGAGT... | Sputcn32_2831 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -60
Score: 94.1 Sequence: TCACTTTAGCTGAGT...
Locus tag: Ssed_3386
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -60 | 94.1 | TCACTTTAGCTGAGT... | Ssed_3386 |
| Shewanella sp ANA-3 | ||||
|
Position: -56
Score: 95.76 Sequence: CCTCTGGCTGAGTTA...
Locus tag: Shewana3_1033
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 95.8 | CCTCTGGCTGAGTTA... | Shewana3_1033 |
| Shewanella sp MR-4 | ||||
|
Position: -56
Score: 95.76 Sequence: CCTCTGGCTGAGTTA...
Locus tag: Shewmr4_1029
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 95.8 | CCTCTGGCTGAGTTA... | Shewmr4_1029 |
| Shewanella sp MR-7 | ||||
|
Position: -56
Score: 95.76 Sequence: CCTCTGGCTGAGTTA...
Locus tag: Shewmr7_1094
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 95.8 | CCTCTGGCTGAGTTA... | Shewmr7_1094 |
| Shewanella sp W3-18-1 | ||||
|
Position: -56
Score: 98.25 Sequence: CCTCTGGCTGAGTTA...
Locus tag: Sputw3181_1073
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -56 | 98.2 | CCTCTGGCTGAGTTA... | Sputw3181_1073 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -61
Score: 90.6 Sequence: TCGCTTTAGCTGAGT...
Locus tag: Swoo_3558
Name: rpsO Funciton: SSU ribosomal protein S15p (S13e) |
||||
| rpsO | -61 | 90.6 | TCGCTTTAGCTGAGT... | Swoo_3558 |