Orthologous regulated operons containing rplU gene
| Regulator type: | RNA regulatory element |
| Name: | L21_leader |
| RFAM: | RF00559 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Thermotogae |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Thermosipho africanus TCF52B | ||||
|
Position: -98
Score: 19.34 Sequence: TCTTAGGTTATAGTC...
Locus tag: THA_1316
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: THA_1315
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: THA_1314
Name: rpmA Funciton: LSU ribosomal protein L27p
Locus tag: THA_1313
Name: ribU Funciton: Substrate-specific component RibU of riboflavin ECF transporter
Locus tag: THA_1312
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: THA_1311
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplU-ysxB-rpmA-ribU-rplM-rpsI | -98 | 19.3 | TCTTAGGTTATAGTC... | THA_1316 |
| Thermosipho melanesiensis BI429 | ||||
|
Position: -95
Score: 16.46 Sequence: CTTAAGGTTATAGTC...
Locus tag: Tmel_1036
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: Tmel_1035
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: Tmel_1034
Name: rpmA Funciton: LSU ribosomal protein L27p
Locus tag: Tmel_1033
Name: ribU Funciton: Substrate-specific component RibU of riboflavin ECF transporter
Locus tag: Tmel_1032
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: Tmel_1031
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
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| rplU-ysxB-rpmA-ribU-rplM-rpsI | -95 | 16.5 | CTTAAGGTTATAGTC... | Tmel_1036 |
| Thermotoga lettingae TMO | ||||
|
Position: -95
Score: 23.8 Sequence: AGTATTTACACAAGC...
Locus tag: Tlet_1979
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: Tlet_1978
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: Tlet_1977
Name: rpmA Funciton: LSU ribosomal protein L27p
Locus tag: Tlet_1976
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: Tlet_1975
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
||||
| rplU-ysxB-rpmA-rplM-rpsI | -95 | 23.8 | AGTATTTACACAAGC... | Tlet_1979 |
| Thermotoga neapolitana DSM 4359 | ||||
|
Position: -7
Score: 19.27 Sequence: GCTTGAAGTGCGTCG...
Locus tag: CTN_1035
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: CTN_1036
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: CTN_1037
Name: rpmA Funciton: LSU ribosomal protein L27p
Locus tag: CTN_1038
Name: ribU Funciton: Substrate-specific component RibU of riboflavin ECF transporter
Locus tag: CTN_1039
Name: rplM Funciton: LSU ribosomal protein L13p (L13Ae)
Locus tag: CTN_1040
Name: rpsI Funciton: SSU ribosomal protein S9p (S16e) |
||||
| rplU-ysxB-rpmA-ribU-rplM-rpsI | -7 | 19.3 | GCTTGAAGTGCGTCG... | CTN_1035 |