Orthologous regulated operons containing rplU gene
| Regulator type: | RNA regulatory element |
| Name: | L21_leader |
| RFAM: | RF00559 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Anoxybacillus flavithermus WK1 | ||||
|
Position: -41
Score: 56.69 Sequence: CCGTGCTACAACCGC...
Locus tag: Aflv_0694
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: Aflv_0695
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: Aflv_0696
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -41 | 56.7 | CCGTGCTACAACCGC... | Aflv_0694 |
| Bacillus amyloliquefaciens FZB42 | ||||
|
Position: -88
Score: 56.8 Sequence: ACCAATGCTACAACC...
Locus tag: RBAM_025010
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: RBAM_025000
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: RBAM_024990
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -88 | 56.8 | ACCAATGCTACAACC... | RBAM_025010 |
| Bacillus cereus ATCC 14579 | ||||
|
Position: -93
Score: 58.1 Sequence: CTATATGCTACAACC...
Locus tag: BC4438
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: BC4437
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: BC4436
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -93 | 58.1 | CTATATGCTACAACC... | BC4438 |
| Bacillus clausii KSM-K16 | ||||
|
Position: -87
Score: 51.9 Sequence: AATGAACTTACAACC...
Locus tag: ABC2602
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: ABC2601
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: ABC2600
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -87 | 51.9 | AATGAACTTACAACC... | ABC2602 |
| Bacillus halodurans C-125 | ||||
|
Position: -86
Score: 64.14 Sequence: CCAATGACTACAACC...
Locus tag: BH3011
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: BH3010
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: BH3009
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -86 | 64.1 | CCAATGACTACAACC... | BH3011 |
| Bacillus licheniformis DSM 13 | ||||
|
Position: -88
Score: 61.95 Sequence: ACCCGTGCTACAACC...
Locus tag: BLi02923
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: BLi02922
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: BLi02921
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -88 | 62 | ACCCGTGCTACAACC... | BLi02923 |
| Bacillus pumilus SAFR-032 | ||||
|
Position: -86
Score: 55.84 Sequence: ACCCGTGCTACAACC...
Locus tag: BPUM_2436
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: BPUM_2435
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: BPUM_2434
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -86 | 55.8 | ACCCGTGCTACAACC... | BPUM_2436 |
| Bacillus subtilis subsp. subtilis str. 168 | ||||
|
Position: -90
Score: 57.21 Sequence: ACCATTGCTACAACC...
Locus tag: BSU27960
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: BSU27950
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: BSU27940
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -90 | 57.2 | ACCATTGCTACAACC... | BSU27960 |
| Geobacillus kaustophilus HTA426 | ||||
|
Position: -95
Score: 53.85 Sequence: ACCCGCACTACAACC...
Locus tag: GK2610
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: GK2609
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: GK2608
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -95 | 53.8 | ACCCGCACTACAACC... | GK2610 |
| Oceanobacillus iheyensis HTE831 | ||||
|
Position: -137
Score: 35.75 Sequence: GCCCGTGCTACAACC...
Locus tag: OB2046
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: OB2045
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: OB2044
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -137 | 35.8 | GCCCGTGCTACAACC... | OB2046 |
| Paenibacillus sp. JDR-2 | ||||
|
Position: -97
Score: 33.75 Sequence: GGACATGCATGAACC...
Locus tag: Pjdr2_4413
Name: rplU Funciton: LSU ribosomal protein L21p
Locus tag: Pjdr2_4412
Name: ysxB Funciton: FIG139598: Potential ribosomal protein
Locus tag: Pjdr2_4411
Name: rpmA Funciton: LSU ribosomal protein L27p |
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| rplU-ysxB-rpmA | -97 | 33.8 | GGACATGCATGAACC... | Pjdr2_4413 |