Orthologous regulated operons containing ykkC gene
| Regulator type: | RNA regulatory element |
| Name: | mini-ykkC |
| RFAM: | RF01068 |
| Regulation mode: | |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Citrobacter koseri ATCC BAA-895 | ||||
|
Position: -64
Score: 41.87 Sequence: CTTTGCAGGACGACC...
Locus tag: CKO_03683
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
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| ykkC | -64 | 41.9 | CTTTGCAGGACGACC... | CKO_03683 |
| Edwardsiella tarda EIB202 | ||||
|
Position: -79
Score: 33.15 Sequence: GTGCGGGACGACCCG...
Locus tag: ETAE_0334
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -79 | 33.2 | GTGCGGGACGACCCG... | ETAE_0334 |
| Enterobacter sp. 638 | ||||
|
Position: -73
Score: 42.1 Sequence: TTGCGGGACGACCTG...
Locus tag: Ent638_0337
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -73 | 42.1 | TTGCGGGACGACCTG... | Ent638_0337 |
| Escherichia coli str. K-12 substr. MG1655 | ||||
|
Position: -63
Score: 46.34 Sequence: TTGCAGGACGACCTG...
Locus tag: b4148
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -63 | 46.3 | TTGCAGGACGACCTG... | b4148 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | ||||
|
Position: -57
Score: 41.45 Sequence: TTACGGGACGACCCG...
Locus tag: KPN_04548
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -57 | 41.5 | TTACGGGACGACCCG... | KPN_04548 |
| Photorhabdus luminescens subsp. laumondii TTO1 | ||||
|
Position: -71
Score: 38.77 Sequence: TTATCCGGGACGACC...
Locus tag: plu4129
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
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| ykkC | -71 | 38.8 | TTATCCGGGACGACC... | plu4129 |
| Proteus mirabilis HI4320 | ||||
|
Position: -69
Score: 39.06 Sequence: GGCTGGGACGACCCA...
Locus tag: PMI3584
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
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| ykkC | -69 | 39.1 | GGCTGGGACGACCCA... | PMI3584 |
| Salmonella typhimurium LT2 | ||||
|
Position: -65
Score: 39.65 Sequence: TTACAGGACGACCTG...
Locus tag: STM4338
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -65 | 39.7 | TTACAGGACGACCTG... | STM4338 |
| Serratia proteamaculans 568 | ||||
|
Position: -64
Score: 41.2 Sequence: AAACGGGACGACCTG...
Locus tag: Spro_0415
Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE |
||||
| ykkC | -64 | 41.2 | AAACGGGACGACCTG... | Spro_0415 |