Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rplT gene

Properties
Regulator type: RNA regulatory element
Name: L20_leader
RFAM: RF00558
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Macrococcus caseolyticus JCSC5402
Position: -144
Score: 69.56
Sequence: AACGGACAAGTAGAA...
Locus tag: MCCL_1345
Name: infC
Funciton: Translation initiation factor 3
Locus tag: MCCL_1344
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: MCCL_1343
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -144 69.6 AACGGACAAGTAGAA... MCCL_1345
Staphylococcus aureus subsp. aureus N315
Position: -164
Score: 86.03
Sequence: ACGAACCAAGTAGAA...
Locus tag: SA1504
Name: infC
Funciton: Translation initiation factor 3
Locus tag: SA1503
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: SA1502
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -164 86 ACGAACCAAGTAGAA... SA1504
Staphylococcus capitis SK14
Position: -150
Score: 81.61
Sequence: GAACCAAGTAGAAGC...
Locus tag: STACA0001_2347
Name: infC
Funciton: Translation initiation factor 3
Locus tag: STACA0001_2348
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: STACA0001_2349
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -150 81.6 GAACCAAGTAGAAGC... STACA0001_2347
Staphylococcus carnosus subsp. carnosus TM300
Position: -163
Score: 74.02
Sequence: ACGAACCAAGTAGAA...
Locus tag: Sca_1286
Name: infC
Funciton: Translation initiation factor 3
Locus tag: Sca_1285
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: Sca_1284
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -163 74 ACGAACCAAGTAGAA... Sca_1286
Staphylococcus epidermidis ATCC 12228
Position: -151
Score: 79.25
Sequence: ACGAACCAAGTAGAA...
Locus tag: SE1355
Name: infC
Funciton: Translation initiation factor 3
Locus tag: SE1354
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: SE1353
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -151 79.2 ACGAACCAAGTAGAA... SE1355
Staphylococcus haemolyticus JCSC1435
Position: -83
Score: 79.77
Sequence: GTACCAAGTAGAAAC...
Locus tag: SH1245
Name: infC
Funciton: Translation initiation factor 3
Locus tag: SH1246
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: SH1247
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -83 79.8 GTACCAAGTAGAAAC... SH1245
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -152
Score: 86.2
Sequence: GAACCAAGTAGAAGC...
Locus tag: SSP1084
Name: infC
Funciton: Translation initiation factor 3
Locus tag: SSP1085
Name: rpmI
Funciton: LSU ribosomal protein L35p
Locus tag: SSP1086
Name: rplT
Funciton: LSU ribosomal protein L20p
infC-rpmI-rplT -152 86.2 GAACCAAGTAGAAGC... SSP1084
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