Orthologous regulated operons containing ykkD gene

Properties
Regulator type:	RNA regulatory element
Name:	ykkC-yxkD
RFAM:	RF00442
Regulation mode:
Biological process:	Multidrug resistance
Effector:
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -174 Score: 90.77 Sequence: GACATGTTTTCTAGG... Locus tag: RBAM_012900 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: RBAM_012910 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-174	90.8	GACATGTTTTCTAGG...	RBAM_012900
Bacillus clausii KSM-K16
Position: -150 Score: 80.94 Sequence: GCACAAATGCGCCTA... Locus tag: ABC3844 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: ABC3843 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-150	80.9	GCACAAATGCGCCTA...	ABC3844
Bacillus halodurans C-125
Position: -155 Score: 94.79 Sequence: GCCAAATGTTTTCTA... Locus tag: BH0686 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: BH0685 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-155	94.8	GCCAAATGTTTTCTA...	BH0686
Bacillus licheniformis DSM 13
Position: -162 Score: 94.71 Sequence: TTAAAGTTTTCTAGG... Locus tag: BLi01409 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: BLi01410 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-162	94.7	TTAAAGTTTTCTAGG...	BLi01409
Bacillus pumilus SAFR-032
Position: -174 Score: 84.17 Sequence: AATTGGTTTTCTAGG... Locus tag: BPUM_1202 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: BPUM_1203 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-174	84.2	AATTGGTTTTCTAGG...	BPUM_1202
Bacillus subtilis subsp. subtilis str. 168
Position: -188 Score: 97.12 Sequence: GTAAAGTTTTCTAGG... Locus tag: BSU13090 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: BSU13100 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-188	97.1	GTAAAGTTTTCTAGG...	BSU13090
Oceanobacillus iheyensis HTE831
Position: -209 Score: 90.73 Sequence: CGTAAATACTTTCTA... Locus tag: OB3264 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: OB3263 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-209	90.7	CGTAAATACTTTCTA...	OB3264
Paenibacillus sp. JDR-2
Position: -180 Score: 85.38 Sequence: TAGTGGTTTTCTAGG... Locus tag: Pjdr2_5861 Name: ykkC Funciton: Quaternary ammonium compound-resistance protein sugE Locus tag: Pjdr2_5862 Name: ykkD Funciton: Quaternary ammonium compound-resistance protein sugE
ykkC-ykkD	-180	85.4	TAGTGGTTTTCTAGG...	Pjdr2_5861

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing ykkD gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --