Orthologous regulated operons containing trpC gene
| Regulator type: | RNA regulatory element |
| Name: | Trp_leader |
| RFAM: | RF00513 |
| Regulation mode: | |
| Biological process: | Tryptophan biosynthesis |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -149
Score: 35.05 Sequence: ACTGGTGGTGGCACT...
Locus tag: Sama_2129
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sama_2130
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sama_2131
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sama_2132
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sama_2133
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sama_2134
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -149 | 35 | ACTGGTGGTGGCACT... | Sama_2129 |
| Shewanella baltica OS155 | ||||
|
Position: -205
Score: 43.2 Sequence: TCATTTGGTGGTGGC...
Locus tag: Sbal_2701
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sbal_2702
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sbal_2703
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sbal_2704
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sbal_2705
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sbal_2706
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -205 | 43.2 | TCATTTGGTGGTGGC... | Sbal_2701 |
| Shewanella denitrificans OS217 | ||||
|
Position: -182
Score: 45.89 Sequence: TTTCTTGGTGGTGGC...
Locus tag: Sden_2450
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sden_2451
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sden_2452
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sden_2453
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sden_2454
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sden_2455
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -182 | 45.9 | TTTCTTGGTGGTGGC... | Sden_2450 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -196
Score: 33.57 Sequence: ACATGGTGGTGGCAC...
Locus tag: Sfri_1429
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sfri_1428
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sfri_1427
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sfri_1426
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sfri_1425
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sfri_1424
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -196 | 33.6 | ACATGGTGGTGGCAC... | Sfri_1429 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -221
Score: 40.48 Sequence: CATCAATTGGTGGTG...
Locus tag: Shal_1658
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shal_1657
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shal_1656
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shal_1655
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shal_1654
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shal_1653
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -221 | 40.5 | CATCAATTGGTGGTG... | Shal_1658 |
| Shewanella loihica PV-4 | ||||
|
Position: -200
Score: 34.5 Sequence: TCAACTGGTGGTGGC...
Locus tag: Shew_2251
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shew_2252
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shew_2253
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shew_2254
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shew_2255
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shew_2256
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -200 | 34.5 | TCAACTGGTGGTGGC... | Shew_2251 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -160
Score: 44.05 Sequence: TCATTTGGTGGTGGC...
Locus tag: SO_3019
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: SO_3020
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: SO_3021
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: SO_3022
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: SO_3023
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: SO_3024
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -160 | 44 | TCATTTGGTGGTGGC... | SO_3019 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -224
Score: 41.52 Sequence: CATTAATTGGTGGTG...
Locus tag: Spea_1590
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Spea_1589
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Spea_1588
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Spea_1587
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Spea_1586
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Spea_1585
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -224 | 41.5 | CATTAATTGGTGGTG... | Spea_1590 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -231
Score: 45.03 Sequence: CATTAATTGGTGGTG...
Locus tag: swp_1923
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: swp_1922
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: swp_1921
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: swp_1920
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: swp_1919
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: swp_1918
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -231 | 45 | CATTAATTGGTGGTG... | swp_1923 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -204
Score: 42.57 Sequence: TCATTTGGTGGTGGC...
Locus tag: Sputcn32_2403
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sputcn32_2404
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sputcn32_2405
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sputcn32_2406
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sputcn32_2407
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sputcn32_2408
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -204 | 42.6 | TCATTTGGTGGTGGC... | Sputcn32_2403 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -184
Score: 46.52 Sequence: CATTAATTGGTGGTG...
Locus tag: Ssed_1686
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Ssed_1685
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Ssed_1684
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Ssed_1683
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Ssed_1682
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Ssed_1681
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -184 | 46.5 | CATTAATTGGTGGTG... | Ssed_1686 |
| Shewanella sp ANA-3 | ||||
|
Position: -160
Score: 40.72 Sequence: CATCATTTGGTGGTG...
Locus tag: Shewana3_1520
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewana3_1519
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewana3_1518
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewana3_1517
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewana3_1516
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewana3_1515
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -160 | 40.7 | CATCATTTGGTGGTG... | Shewana3_1520 |
| Shewanella sp MR-4 | ||||
|
Position: -160
Score: 44.82 Sequence: CATCATTTGGTGGTG...
Locus tag: Shewmr4_1462
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewmr4_1461
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewmr4_1460
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewmr4_1459
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewmr4_1458
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewmr4_1457
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -160 | 44.8 | CATCATTTGGTGGTG... | Shewmr4_1462 |
| Shewanella sp MR-7 | ||||
|
Position: -160
Score: 44.82 Sequence: CATCATTTGGTGGTG...
Locus tag: Shewmr7_1528
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Shewmr7_1527
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Shewmr7_1526
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Shewmr7_1525
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Shewmr7_1524
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Shewmr7_1523
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -160 | 44.8 | CATCATTTGGTGGTG... | Shewmr7_1528 |
| Shewanella sp W3-18-1 | ||||
|
Position: -200
Score: 42.57 Sequence: CATCATTTGGTGGTG...
Locus tag: Sputw3181_1605
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Sputw3181_1604
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Sputw3181_1603
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Sputw3181_1602
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Sputw3181_1601
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Sputw3181_1600
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -200 | 42.6 | CATCATTTGGTGGTG... | Sputw3181_1605 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -179
Score: 49.36 Sequence: TCAATTGGTGGTGGC...
Locus tag: Swoo_2912
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27) # TrpAa
Locus tag: Swoo_2913
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27) # TrpAb
Locus tag: Swoo_2914
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: Swoo_2915
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: Swoo_2916
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: Swoo_2917
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -179 | 49.4 | TCAATTGGTGGTGGC... | Swoo_2912 |