Orthologous regulated operons containing asd gene
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Macrococcus caseolyticus JCSC5402 | ||||
|
Position: -244
Score: 88.74 Sequence: GAAACAGATGAGGCG...
Locus tag: MCCL_1048
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: MCCL_1049
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: MCCL_1050
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: MCCL_1051
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: MCCL_1052
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: MCCL_1053
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: MCCL_1054
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: MCCL_1055
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA | -244 | 88.7 | GAAACAGATGAGGCG... | MCCL_1048 |
| Staphylococcus aureus subsp. aureus N315 | ||||
|
Position: -256
Score: 87.03 Sequence: TATTTTGATGAGGCG...
Locus tag: SA1225
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SA1226
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SA1227
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SA1228
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SA1229
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SA1230
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SA1231
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SA1232
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA | -256 | 87 | TATTTTGATGAGGCG... | SA1225 |
| Staphylococcus capitis SK14 | ||||
|
Position: -261
Score: 92.6 Sequence: GATTTTGATGAGGAG...
Locus tag: STACA0001_1639
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: STACA0001_1640
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: STACA0001_1641
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: STACA0001_1642
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: STACA0001_1643
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: STACA0001_1644
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: STACA0001_1645
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: STACA0001_1646
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA | -261 | 92.6 | GATTTTGATGAGGAG... | STACA0001_1639 |
| Staphylococcus carnosus subsp. carnosus TM300 | ||||
|
Position: -261
Score: 98.14 Sequence: TATTTTGATGAGGCG...
Locus tag: Sca_1037
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Sca_1038
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Sca_1039
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Sca_1040
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Sca_1041
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Sca_1042
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: Sca_1043
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: Sca_1044
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA | -261 | 98.1 | TATTTTGATGAGGCG... | Sca_1037 |
| Staphylococcus epidermidis ATCC 12228 | ||||
|
Position: -232
Score: 98.39 Sequence: GATTTTGATGAGGCG...
Locus tag: SE1073
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SE1074
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SE1075
Name: null Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SE1076
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SE1077
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SE1078
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SE1079
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SE1080
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-SE1075-dapB-dapD-dapL-dapX-lysA | -232 | 98.4 | GATTTTGATGAGGCG... | SE1073 |
| Staphylococcus haemolyticus JCSC1435 | ||||
|
Position: -259
Score: 103.18 Sequence: AAGAAATTGATGAGG...
Locus tag: SH1518
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SH1517
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SH1516
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SH1515
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SH1514
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SH1513
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SH1512
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SH1511
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
||||
| lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA | -259 | 103.2 | AAGAAATTGATGAGG... | SH1518 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | ||||
|
Position: -262
Score: 99.65 Sequence: AAGGTTTTGATGAGG...
Locus tag: SSP1357
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SSP1356
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SSP1355
Name: null Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SSP1354
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SSP1353
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SSP1352
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SSP1351
Name: dapX Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SSP1350
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
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| lysC-asd-SSP1355-dapB-dapD-dapL-dapX-lysA | -262 | 99.7 | AAGGTTTTGATGAGG... | SSP1357 |