Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing asd gene

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Macrococcus caseolyticus JCSC5402
Position: -244
Score: 88.74
Sequence: GAAACAGATGAGGCG...
Locus tag: MCCL_1048
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: MCCL_1049
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: MCCL_1050
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: MCCL_1051
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: MCCL_1052
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: MCCL_1053
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: MCCL_1054
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: MCCL_1055
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA -244 88.7 GAAACAGATGAGGCG... MCCL_1048
Staphylococcus aureus subsp. aureus N315
Position: -256
Score: 87.03
Sequence: TATTTTGATGAGGCG...
Locus tag: SA1225
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SA1226
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SA1227
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SA1228
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SA1229
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SA1230
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SA1231
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SA1232
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA -256 87 TATTTTGATGAGGCG... SA1225
Staphylococcus capitis SK14
Position: -261
Score: 92.6
Sequence: GATTTTGATGAGGAG...
Locus tag: STACA0001_1639
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: STACA0001_1640
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: STACA0001_1641
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: STACA0001_1642
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: STACA0001_1643
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: STACA0001_1644
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: STACA0001_1645
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: STACA0001_1646
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA -261 92.6 GATTTTGATGAGGAG... STACA0001_1639
Staphylococcus carnosus subsp. carnosus TM300
Position: -261
Score: 98.14
Sequence: TATTTTGATGAGGCG...
Locus tag: Sca_1037
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Sca_1038
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Sca_1039
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Sca_1040
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Sca_1041
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Sca_1042
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: Sca_1043
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: Sca_1044
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA -261 98.1 TATTTTGATGAGGCG... Sca_1037
Staphylococcus epidermidis ATCC 12228
Position: -232
Score: 98.39
Sequence: GATTTTGATGAGGCG...
Locus tag: SE1073
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SE1074
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SE1075
Name: null
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SE1076
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SE1077
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SE1078
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SE1079
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SE1080
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-SE1075-dapB-dapD-dapL-dapX-lysA -232 98.4 GATTTTGATGAGGCG... SE1073
Staphylococcus haemolyticus JCSC1435
Position: -259
Score: 103.18
Sequence: AAGAAATTGATGAGG...
Locus tag: SH1518
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SH1517
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SH1516
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SH1515
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SH1514
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SH1513
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SH1512
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SH1511
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-dapA-dapB-dapD-dapL-dapX-lysA -259 103.2 AAGAAATTGATGAGG... SH1518
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -262
Score: 99.65
Sequence: AAGGTTTTGATGAGG...
Locus tag: SSP1357
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: SSP1356
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SSP1355
Name: null
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: SSP1354
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: SSP1353
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: SSP1352
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Locus tag: SSP1351
Name: dapX
Funciton: Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7)
Locus tag: SSP1350
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC-asd-SSP1355-dapB-dapD-dapL-dapX-lysA -262 99.7 AAGGTTTTGATGAGG... SSP1357
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