Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvP1 gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anoxybacillus flavithermus WK1
Position: -229
Score: 60.53
Sequence: TGAGAACAAGGGGAG...
Position: -145
Score: 47.22
Sequence: GACGCAGCTCTGGAG...
Locus tag: Aflv_0915
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Aflv_0916
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: Aflv_0917
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -229 60.5 TGAGAACAAGGGGAG... Aflv_0915
-145 47.2 GACGCAGCTCTGGAG...
Bacillus amyloliquefaciens FZB42
Position: -280
Score: 61.23
Sequence: AATGACAGCAAGGGG...
Position: -176
Score: 24.75
Sequence: ACTCTGGAGAGTGTC...
Locus tag: RBAM_022890
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RBAM_022880
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: RBAM_022870
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -280 61.2 AATGACAGCAAGGGG... RBAM_022890
-176 24.8 ACTCTGGAGAGTGTC...
Bacillus clausii KSM-K16
Position: -274
Score: 59.73
Sequence: GATGATGGTAAAGGG...
Position: -185
Score: 35.07
Sequence: TTGACGCATCTCTGG...
Locus tag: ABC2495
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: ABC2494
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: ABC2493
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -274 59.7 GATGATGGTAAAGGG... ABC2495
-185 35.1 TTGACGCATCTCTGG...
Bacillus halodurans C-125
Position: -417
Score: 62.4
Sequence: GATGAAAGCAAGGGG...
Position: -327
Score: 43.11
Sequence: TCGACGCAGCTCTGG...
Locus tag: BH2816
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BH2815
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: BH2814
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -417 62.4 GATGAAAGCAAGGGG... BH2816
-327 43.1 TCGACGCAGCTCTGG...
Bacillus licheniformis DSM 13
Position: -350
Score: 49.62
Sequence: AATGACGGCAAGGGG...
Position: -250
Score: 37.99
Sequence: TTGACGCAACTCTGG...
Locus tag: BLi02631
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BLi02630
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: BLi02629
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -350 49.6 AATGACGGCAAGGGG... BLi02631
-250 38 TTGACGCAACTCTGG...
Bacillus pumilus SAFR-032
Position: -312
Score: 62.4
Sequence: GATGATGGTATGGGG...
Position: -201
Score: 35.25
Sequence: ACTCTGGAGAGTGTT...
Locus tag: BPUM_2189
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BPUM_2188
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: BPUM_2187
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -312 62.4 GATGATGGTATGGGG... BPUM_2189
-201 35.2 ACTCTGGAGAGTGTT...
Bacillus subtilis subsp. subtilis str. 168
Position: -274
Score: 60.29
Sequence: AATGACAGCAAGGGG...
Position: -177
Score: 33.77
Sequence: TCGACGCAACTCTGG...
Locus tag: BSU24570
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BSU24560
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: BSU24550
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -274 60.3 AATGACAGCAAGGGG... BSU24570
-177 33.8 TCGACGCAACTCTGG...
Geobacillus kaustophilus HTA426
Position: -276
Score: 60.6
Sequence: GATGACGGCAAGGGG...
Position: -192
Score: 38.15
Sequence: TTGACGCAGCTCTGG...
Locus tag: GK2425
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: GK2424
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: GK2423
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -276 60.6 GATGACGGCAAGGGG... GK2425
-192 38.2 TTGACGCAGCTCTGG...
Oceanobacillus iheyensis HTE831
Position: -222
Score: 53.47
Sequence: GAAGATTACAAGGGG...
Position: -135
Score: 43.37
Sequence: ATGACGCAACTCTGG...
Locus tag: OB1904
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: OB1903
Name: gcvP1
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: OB1902
Name: gcvP2
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
gcvT-gcvP1-gcvP2 -222 53.5 GAAGATTACAAGGGG... OB1904
-135 43.4 ATGACGCAACTCTGG...
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