Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing lysC gene

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Phylum: Thermotogae
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Petrotoga mobilis SJ95
Position: -253
Score: 101.15
Sequence: TATTTAAAGCGGAGG...
Locus tag: Pmob_1226
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Pmob_1225
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Pmob_1224
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Pmob_1223
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Pmob_1222
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Pmob_1221
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Pmob_1220
Name: argD
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
Locus tag: Pmob_1219
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-lysA-dapA-dapB-dapD-lysC-argD-dapL -253 101.2 TATTTAAAGCGGAGG... Pmob_1226
Thermosipho africanus TCF52B
Position: -246
Score: 125.16
Sequence: ATACGATCGGAGGCG...
Locus tag: THA_170
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: THA_171
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: THA_172
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: THA_173
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: THA_174
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: THA_175
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: THA_176
Name: argD
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
Locus tag: THA_177
Name: null
Funciton: lipase/acylhydrolase, GDSL family
asd-dapF-dapA-dapB-dapD-lysC-argD-THA_177 -246 125.2 ATACGATCGGAGGCG... THA_170
Thermosipho melanesiensis BI429
Position: -246
Score: 120.39
Sequence: ATACGATCGGAGGTG...
Locus tag: Tmel_1873
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tmel_1874
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tmel_1875
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tmel_1876
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tmel_1877
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tmel_1878
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tmel_1879
Name: argD
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
asd-dapF-dapA-dapB-dapD-lysC-argD -246 120.4 ATACGATCGGAGGTG... Tmel_1873
Thermotoga maritima MSB8
Position: -261
Score: 90.7
Sequence: TTGACCCGACGGAGG...
Locus tag: TM1523
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: TM1522
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: TM1521
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: TM1520
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: TM1519
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: TM1518
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: TM1517
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: TM1516
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL -261 90.7 TTGACCCGACGGAGG... TM1523
Thermotoga naphthophila RKU-10
Position: -266
Score: 85.62
Sequence: GACCCGACGGAGGCG...
Locus tag: Tnap_1286
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tnap_1287
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tnap_1288
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tnap_1289
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tnap_1290
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tnap_1291
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tnap_1292
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Tnap_1293
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL -266 85.6 GACCCGACGGAGGCG... Tnap_1286
Thermotoga neapolitana DSM 4359
Position: -267
Score: 88.92
Sequence: GACCCGACGGAGGAG...
Locus tag: CTN_0970
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: CTN_0971
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: CTN_0972
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: CTN_0973
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: CTN_0974
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: CTN_0975
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: CTN_0976
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: CTN_0977
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL -267 88.9 GACCCGACGGAGGAG... CTN_0970
Thermotoga petrophila RKU-1
Position: -266
Score: 85.62
Sequence: GACCCGACGGAGGCG...
Locus tag: Tpet_1269
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tpet_1270
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tpet_1271
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tpet_1272
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tpet_1273
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tpet_1274
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tpet_1275
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Tpet_1276
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL -266 85.6 GACCCGACGGAGGCG... Tpet_1269
Thermotoga sp. RQ2
Position: -267
Score: 90.7
Sequence: TTGACCCGACGGAGG...
Locus tag: TRQ2_1417
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: TRQ2_1416
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: TRQ2_1415
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: TRQ2_1414
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: TRQ2_1413
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: TRQ2_1412
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: TRQ2_1411
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: TRQ2_1410
Name: dapL
Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL -267 90.7 TTGACCCGACGGAGG... TRQ2_1417
Thermotogales bacterium TBF 19.5.1
Position: -259
Score: 95.32
Sequence: TTTACCCCACAGAGG...
Locus tag: Kole_0108
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Kole_0107
Name: dapF
Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Kole_0106
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Kole_0105
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Kole_0104
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Kole_0103
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Kole_0102
Name: argD
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
asd-dapF-dapA-dapB-dapD-lysC-argD -259 95.3 TTTACCCCACAGAGG... Kole_0108
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