Orthologous regulated operons containing asd gene
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Thermotogae |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Petrotoga mobilis SJ95 | ||||
|
Position: -253
Score: 101.15 Sequence: TATTTAAAGCGGAGG...
Locus tag: Pmob_1226
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Pmob_1225
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Pmob_1224
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Pmob_1223
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Pmob_1222
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Pmob_1221
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Pmob_1220
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
Locus tag: Pmob_1219
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-lysA-dapA-dapB-dapD-lysC-argD-dapL | -253 | 101.2 | TATTTAAAGCGGAGG... | Pmob_1226 |
| Thermosipho africanus TCF52B | ||||
|
Position: -246
Score: 125.16 Sequence: ATACGATCGGAGGCG...
Locus tag: THA_170
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: THA_171
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: THA_172
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: THA_173
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: THA_174
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: THA_175
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: THA_176
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11)
Locus tag: THA_177
Name: null Funciton: lipase/acylhydrolase, GDSL family |
||||
| asd-dapF-dapA-dapB-dapD-lysC-argD-THA_177 | -246 | 125.2 | ATACGATCGGAGGCG... | THA_170 |
| Thermosipho melanesiensis BI429 | ||||
|
Position: -246
Score: 120.39 Sequence: ATACGATCGGAGGTG...
Locus tag: Tmel_1873
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tmel_1874
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tmel_1875
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tmel_1876
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tmel_1877
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tmel_1878
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tmel_1879
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) |
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| asd-dapF-dapA-dapB-dapD-lysC-argD | -246 | 120.4 | ATACGATCGGAGGTG... | Tmel_1873 |
| Thermotoga maritima MSB8 | ||||
|
Position: -261
Score: 90.7 Sequence: TTGACCCGACGGAGG...
Locus tag: TM1523
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: TM1522
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: TM1521
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: TM1520
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: TM1519
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: TM1518
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: TM1517
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: TM1516
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL | -261 | 90.7 | TTGACCCGACGGAGG... | TM1523 |
| Thermotoga naphthophila RKU-10 | ||||
|
Position: -266
Score: 85.62 Sequence: GACCCGACGGAGGCG...
Locus tag: Tnap_1286
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tnap_1287
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tnap_1288
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tnap_1289
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tnap_1290
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tnap_1291
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tnap_1292
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Tnap_1293
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL | -266 | 85.6 | GACCCGACGGAGGCG... | Tnap_1286 |
| Thermotoga neapolitana DSM 4359 | ||||
|
Position: -267
Score: 88.92 Sequence: GACCCGACGGAGGAG...
Locus tag: CTN_0970
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: CTN_0971
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: CTN_0972
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: CTN_0973
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: CTN_0974
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: CTN_0975
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: CTN_0976
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: CTN_0977
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL | -267 | 88.9 | GACCCGACGGAGGAG... | CTN_0970 |
| Thermotoga petrophila RKU-1 | ||||
|
Position: -266
Score: 85.62 Sequence: GACCCGACGGAGGCG...
Locus tag: Tpet_1269
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Tpet_1270
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Tpet_1271
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Tpet_1272
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Tpet_1273
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Tpet_1274
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Tpet_1275
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: Tpet_1276
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL | -266 | 85.6 | GACCCGACGGAGGCG... | Tpet_1269 |
| Thermotoga sp. RQ2 | ||||
|
Position: -267
Score: 90.7 Sequence: TTGACCCGACGGAGG...
Locus tag: TRQ2_1417
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: TRQ2_1416
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: TRQ2_1415
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: TRQ2_1414
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: TRQ2_1413
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: TRQ2_1412
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: TRQ2_1411
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
Locus tag: TRQ2_1410
Name: dapL Funciton: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) |
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| asd-dapF-dapA-dapB-dapD-lysC-lysA-dapL | -267 | 90.7 | TTGACCCGACGGAGG... | TRQ2_1417 |
| Thermotogales bacterium TBF 19.5.1 | ||||
|
Position: -259
Score: 95.32 Sequence: TTTACCCCACAGAGG...
Locus tag: Kole_0108
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: Kole_0107
Name: dapF Funciton: Diaminopimelate epimerase (EC 5.1.1.7)
Locus tag: Kole_0106
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: Kole_0105
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: Kole_0104
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
Locus tag: Kole_0103
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: Kole_0102
Name: argD Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) |
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| asd-dapF-dapA-dapB-dapD-lysC-argD | -259 | 95.3 | TTTACCCCACAGAGG... | Kole_0108 |