Orthologous regulated operons containing cobD gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Thermotogae |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Fervidobacterium nodosum Rt17-B1 | ||||
|
Position: -265
Score: 99.56 Sequence: AAAAACAAACCGAAT...
Locus tag: Fnod_1365
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Fnod_1366
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Fnod_1367
Name: null Funciton: Putative xylose isomerase domain protein
Locus tag: Fnod_1368
Name: cobS Funciton: Cobalamin synthase
Locus tag: Fnod_1369
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Fnod_1370
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Fnod_1371
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Fnod_1372
Name: Fnod_1372 Funciton: Putative ATP binding protein
Locus tag: Fnod_1373
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
||||
| cobT-cobU-Fnod_1367-cobS-cbiP-cbiB-cobD-Fnod_1372-btuR | -265 | 99.6 | AAAAACAAACCGAAT... | Fnod_1365 |
| Thermosipho africanus TCF52B | ||||
|
Position: -602
Score: 112.02 Sequence: AATATAGAAAACCAT...
Locus tag: THA_1046
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: THA_1045
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: THA_1044
Name: null Funciton: Putative xylose isomerase domain protein
Locus tag: THA_1043
Name: cobS Funciton: Cobalamin synthase
Locus tag: THA_1042
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: THA_1041
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: THA_1040
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: THA_1039
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
||||
| cobT-cobU-THA_1044-cobS-cbiP-cbiB-cobD-btuR | -602 | 112 | AATATAGAAAACCAT... | THA_1046 |
| Thermosipho melanesiensis BI429 | ||||
|
Position: -219
Score: 113.91 Sequence: TATAAATTGTTACTA...
Locus tag: Tmel_0854
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Tmel_0855
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Tmel_0856
Name: null Funciton: Putative xylose isomerase domain protein
Locus tag: Tmel_0857
Name: cobS Funciton: Cobalamin synthase
Locus tag: Tmel_0858
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Tmel_0859
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Tmel_0860
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Tmel_0861
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
||||
| cobT-cobU-Tmel_0856-cobS-cbiP-cbiB-cobD-btuR | -219 | 113.9 | TATAAATTGTTACTA... | Tmel_0854 |
| Thermotoga lettingae TMO | ||||
|
Position: -582
Score: 105.26 Sequence: TGATAAAATAAATAT...
Locus tag: Tlet_1236
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Tlet_1237
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Tlet_1238
Name: null Funciton: Putative xylose isomerase domain protein
Locus tag: Tlet_1239
Name: cobS Funciton: Cobalamin synthase
Locus tag: Tlet_1240
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Tlet_1241
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Tlet_1242
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) |
||||
| cobT-cobU-Tlet_1238-cobS-cbiB-cobD-btuR | -582 | 105.3 | TGATAAAATAAATAT... | Tlet_1236 |