Orthologous regulated operons containing SO3711 gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella sp ANA-3 | ||||
|
Position: -348
Score: 58.5 Sequence: CTCAAAGGTCGCAGA...
Locus tag: Shewana3_3280
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewana3_3279
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewana3_3278
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewana3_3277
Name: cobS Funciton: Cobalamin synthase
Locus tag: Shewana3_3276
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewana3_3275
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Shewana3_3274
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewana3_3273
Name: Shewana3_3273 Funciton: Hypothetical protein
Locus tag: Shewana3_3272
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF |
||||
| btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewana3_3273-btuF | -348 | 58.5 | CTCAAAGGTCGCAGA... | Shewana3_3280 |
| Shewanella sp MR-4 | ||||
|
Position: -345
Score: 59.44 Sequence: CAAAGGTCGCAGAAA...
Locus tag: Shewmr4_0840
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewmr4_0841
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewmr4_0842
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewmr4_0843
Name: cobS Funciton: Cobalamin synthase
Locus tag: Shewmr4_0844
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewmr4_0845
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Shewmr4_0846
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewmr4_0847
Name: Shewmr4_0847 Funciton: Hypothetical protein
Locus tag: Shewmr4_0848
Name: null Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF |
||||
| btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewmr4_0847-Shewmr4_0848 | -345 | 59.4 | CAAAGGTCGCAGAAA... | Shewmr4_0840 |
| Shewanella sp MR-7 | ||||
|
Position: -347
Score: 59.31 Sequence: CTCAAAGGTCGCAGA...
Locus tag: Shewmr7_3182
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewmr7_3181
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewmr7_3180
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewmr7_3179
Name: cobS Funciton: Cobalamin synthase
Locus tag: Shewmr7_3178
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewmr7_3177
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Shewmr7_3176
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewmr7_3175
Name: Shewmr7_3175 Funciton: Hypothetical protein
Locus tag: Shewmr7_3174
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF |
||||
| btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewmr7_3175-btuF | -347 | 59.3 | CTCAAAGGTCGCAGA... | Shewmr7_3182 |