Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cbiP gene

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -250
Score: 61.05
Sequence: CGGTCATTCACGCCA...
Locus tag: Sama_0760
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Sama_0761
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Sama_0762
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Sama_0763
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Sama_0764
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Sama_0765
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Sama_0766
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -250 61 CGGTCATTCACGCCA... Sama_0760
Shewanella baltica OS155
Position: -266
Score: 53.55
Sequence: TGCCGAGGCACACTG...
Locus tag: Sbal_3366
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Sbal_3365
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Sbal_3364
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Sbal_3363
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Sbal_3362
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Sbal_3361
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Sbal_3360
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -266 53.5 TGCCGAGGCACACTG... Sbal_3366
Shewanella frigidimarina NCIMB 400
Position: -211
Score: 43.37
Sequence: ATCTGCGTCGTAACC...
Locus tag: Sfri_0874
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Sfri_0875
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Sfri_0876
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Sfri_0877
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Sfri_0878
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Sfri_0879
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Sfri_0880
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -211 43.4 ATCTGCGTCGTAACC... Sfri_0874
Shewanella halifaxensis HAW-EB4
Position: -283
Score: 42.95
Sequence: TAAATAAGAATGAAA...
Locus tag: Shal_3460
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shal_3459
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shal_3458
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shal_3457
Name: null
Funciton: hypothetical protein
Locus tag: Shal_3456
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Shal_3455
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shal_3454
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Shal_3453
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-Shal_3457-cobS-cobU-cbiP-btuR -283 43 TAAATAAGAATGAAA... Shal_3460
Shewanella loihica PV-4
Position: -281
Score: 52.35
Sequence: GCCTGCGCCGGGAGT...
Locus tag: Shew_0712
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shew_0713
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shew_0714
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shew_0715
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Shew_0716
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shew_0717
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Shew_0718
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -281 52.3 GCCTGCGCCGGGAGT... Shew_0712
Shewanella oneidensis MR-1
Position: -475
Score: 57.83
Sequence: TAAATGTCGCAGAAA...
Locus tag: SO_1033
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: SO_1034
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: SO_1035
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: SO_1036
Name: cobS
Funciton: Cobalamin synthase
Locus tag: SO_1037
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: SO_1038
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: SO_1039
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -475 57.8 TAAATGTCGCAGAAA... SO_1033
Shewanella pealeana ATCC 700345
Position: -272
Score: 45.22
Sequence: AGCTTATAATAAAAA...
Locus tag: Spea_3382
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Spea_3381
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Spea_3380
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Spea_3379
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Spea_3378
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Spea_3377
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Spea_3376
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -272 45.2 AGCTTATAATAAAAA... Spea_3382
Shewanella piezotolerans WP3
Position: -204
Score: 42.75
Sequence: AAACTAAATTTGAGT...
Locus tag: swp_0994
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: swp_0995
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: swp_0996
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: swp_0997
Name: cobS
Funciton: Cobalamin synthase
Locus tag: swp_0998
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: swp_0999
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: swp_1000
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -204 42.8 AAACTAAATTTGAGT... swp_0994
Shewanella putrefaciens CN-32
Position: -355
Score: 59.91
Sequence: CCATAACGTCGCAGA...
Locus tag: Sputcn32_2963
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Sputcn32_2962
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Sputcn32_2961
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Sputcn32_2960
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Sputcn32_2959
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Sputcn32_2958
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Sputcn32_2957
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -355 59.9 CCATAACGTCGCAGA... Sputcn32_2963
Shewanella sediminis HAW-EB3
Position: -339
Score: 96.5
Sequence: ATATTCGCATCGACT...
Locus tag: Ssed_2165
Name: btuB
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Ssed_2164
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Ssed_2163
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Ssed_2162
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Ssed_2161
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Ssed_2160
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Ssed_2159
Name: cobC
Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: Ssed_2158
Name: cobT2
Funciton: Predicted nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Ssed_2157
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Ssed_2156
Name: cbiA
Funciton: Cobyrinic acid A,C-diamide synthase
Locus tag: Ssed_2155
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Ssed_2154
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuB-btuD-btuC-cobU-btuF-cobU-cobC-cobT2-cbiP-cbiA-cobS-btuR -339 96.5 ATATTCGCATCGACT... Ssed_2165
Shewanella sp ANA-3
Position: -348
Score: 58.5
Sequence: CTCAAAGGTCGCAGA...
Locus tag: Shewana3_3280
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewana3_3279
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewana3_3278
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewana3_3277
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Shewana3_3276
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewana3_3275
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Shewana3_3274
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewana3_3273
Name: Shewana3_3273
Funciton: Hypothetical protein
Locus tag: Shewana3_3272
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewana3_3273-btuF -348 58.5 CTCAAAGGTCGCAGA... Shewana3_3280
Shewanella sp MR-4
Position: -345
Score: 59.44
Sequence: CAAAGGTCGCAGAAA...
Locus tag: Shewmr4_0840
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewmr4_0841
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewmr4_0842
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewmr4_0843
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Shewmr4_0844
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewmr4_0845
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Shewmr4_0846
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewmr4_0847
Name: Shewmr4_0847
Funciton: Hypothetical protein
Locus tag: Shewmr4_0848
Name: null
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewmr4_0847-Shewmr4_0848 -345 59.4 CAAAGGTCGCAGAAA... Shewmr4_0840
Shewanella sp MR-7
Position: -347
Score: 59.31
Sequence: CTCAAAGGTCGCAGA...
Locus tag: Shewmr7_3182
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Shewmr7_3181
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Shewmr7_3180
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Shewmr7_3179
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Shewmr7_3178
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Shewmr7_3177
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Shewmr7_3176
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Shewmr7_3175
Name: Shewmr7_3175
Funciton: Hypothetical protein
Locus tag: Shewmr7_3174
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
btuD-btuC-cobT-cobS-cobU-cbiP-btuR-Shewmr7_3175-btuF -347 59.3 CTCAAAGGTCGCAGA... Shewmr7_3182
Shewanella sp W3-18-1
Position: -339
Score: 60.72
Sequence: ATAACGTCGCAGAAA...
Locus tag: Sputw3181_0984
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Sputw3181_0985
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Sputw3181_0986
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Sputw3181_0987
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Sputw3181_0988
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Sputw3181_0989
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Sputw3181_0990
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -339 60.7 ATAACGTCGCAGAAA... Sputw3181_0984
Shewanella woodyi ATCC 51908
Position: -401
Score: 44.14
Sequence: AGGCAGATCCGCAAA...
Locus tag: Swoo_4086
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Swoo_4085
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Swoo_4084
Name: cobT
Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Swoo_4083
Name: cobS
Funciton: Cobalamin synthase
Locus tag: Swoo_4082
Name: cobU
Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Swoo_4081
Name: cbiP
Funciton: Cobyric acid synthase
Locus tag: Swoo_4080
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
btuD-btuC-cobT-cobS-cobU-cbiP-btuR -401 44.1 AGGCAGATCCGCAAA... Swoo_4086
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