Orthologous regulated operons containing cobC gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Cupriavidus taiwanensis | ||||
|
Position: -163
Score: 26.98 Sequence: GACCGGCCACACGCC...
Locus tag: RALTA_A2446
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: RALTA_A2445
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: RALTA_A2444
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: RALTA_A2443
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: RALTA_A2442
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: RALTA_A2441
Name: cobS Funciton: Cobalamin synthase
Locus tag: RALTA_A2440
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-btuR-cobT-cobS-cobC | -163 | 27 | GACCGGCCACACGCC... | RALTA_A2446 |
| Ralstonia eutropha H16 | ||||
|
Position: -219
Score: 24.08 Sequence: ACCGGCCACACGCCA...
Locus tag: H16_A2972
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: H16_A2971
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: H16_A2970
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: H16_A2969
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: H16_A2968
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: H16_A2967
Name: cobS Funciton: Cobalamin synthase
Locus tag: H16_A2966
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-btuR-cobT-cobS-cobC | -219 | 24.1 | ACCGGCCACACGCCA... | H16_A2972 |
| Ralstonia eutropha JMP134 | ||||
|
Position: -322
Score: 47.69 Sequence: CACTCGCGCACGTTC...
Locus tag: Reut_A0654
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Reut_A0655
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Reut_A0656
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Reut_A0657
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Reut_A0658
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Reut_A0659
Name: cobS Funciton: Cobalamin synthase
Locus tag: Reut_A0660
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-btuR-cobT-cobS-cobC | -322 | 47.7 | CACTCGCGCACGTTC... | Reut_A0654 |
| Ralstonia metallidurans CH34 | ||||
|
Position: -260
Score: 45.08 Sequence: TACACTCGCCCCCGT...
Locus tag: Rmet_2789
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Rmet_2788
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Rmet_2787
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Rmet_2786
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Rmet_2785
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Rmet_2784
Name: cobS Funciton: Cobalamin synthase
Locus tag: Rmet_2783
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-btuR-cobT-cobS-cobC | -260 | 45.1 | TACACTCGCCCCCGT... | Rmet_2789 |
| Ralstonia pickettii 12J | ||||
|
Position: -389
Score: 64.85 Sequence: TTAAACTTCGCCCCG...
Locus tag: Rpic_2667
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Rpic_2666
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Rpic_2665
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Rpic_2664
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Rpic_2663
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Rpic_2662
Name: cobS Funciton: Cobalamin synthase
Locus tag: Rpic_2661
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-btuR-cobT-cobS-cobC | -389 | 64.8 | TTAAACTTCGCCCCG... | Rpic_2667 |
| Ralstonia solanacearum GMI1000 | ||||
|
Position: -396
Score: 48.99 Sequence: GTTACACTCGCCGCG...
Locus tag: RS02718
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: RS02719
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: RS02720
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: RSc2397
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: RSc2396
Name: cobS Funciton: Cobalamin synthase
Locus tag: RS02727
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-cobT-cobS-cobC | -396 | 49 | GTTACACTCGCCGCG... | RS02718 |