Orthologous regulated operons containing nrdD gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Bacteroidetes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Bacteroides coprophilus DSM 18228 | ||||
|
Position: -227
Score: 88.73 Sequence: TTTGTATCGCTTTTC...
Locus tag: BACCOPRO_02553
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BACCOPRO_02554
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -227 | 88.7 | TTTGTATCGCTTTTC... | BACCOPRO_02553 |
| Bacteroides dorei DSM 17855 | ||||
|
Position: -214
Score: 90.96 Sequence: CTTTGTAGCCGTCCG...
Locus tag: BACDOR_00281
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BACDOR_00280
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -214 | 91 | CTTTGTAGCCGTCCG... | BACDOR_00281 |
| Bacteroides fragilis NCTC 9343 | ||||
|
Position: -216
Score: 98.12 Sequence: CCTTTGTAGCAGATT...
Locus tag: BF3484
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BF3485
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -216 | 98.1 | CCTTTGTAGCAGATT... | BF3484 |
| Bacteroides ovatus ATCC 8483 | ||||
|
Position: -227
Score: 86.29 Sequence: TCTTTGTATCTGGTT...
Locus tag: BACOVA_01422
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BACOVA_01423
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -227 | 86.3 | TCTTTGTATCTGGTT... | BACOVA_01422 |
| Bacteroides plebeius DSM 17135 | ||||
|
Position: -222
Score: 81.21 Sequence: TTTGTCCTGCTTTTC...
Locus tag: BACPLE_03828
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BACPLE_03827
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -222 | 81.2 | TTTGTCCTGCTTTTC... | BACPLE_03828 |
| Bacteroides thetaiotaomicron VPI-5482 | ||||
|
Position: -214
Score: 94.76 Sequence: TCTTTGTATCCGATT...
Locus tag: BT1998
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BT1999
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -214 | 94.8 | TCTTTGTATCCGATT... | BT1998 |
| Bacteroides vulgatus ATCC 8482 | ||||
|
Position: -214
Score: 90.73 Sequence: CTTTGCAGCTGTCCG...
Locus tag: BVU_1654
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: BVU_1653
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -214 | 90.7 | CTTTGCAGCTGTCCG... | BVU_1654 |