Orthologous regulated operons containing ykoC gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Anoxybacillus flavithermus WK1 | ||||
|
Position: -196
Score: 90.59 Sequence: TGTATTCCACTAGGG...
Locus tag: Aflv_2320
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: Aflv_2319
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Aflv_2318
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Aflv_2317
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: Aflv_2316
Name: tenI Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Aflv_2315
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Aflv_2314
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Aflv_2313
Name: thiG Funciton: Thiazole synthase ThiG
Locus tag: Aflv_2312
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Aflv_2311
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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| tenA-ykoE-ykoD-ykoC-tenI-thiO-thiS-thiG-thiF-thiD | -196 | 90.6 | TGTATTCCACTAGGG... | Aflv_2320 |
| Bacillus amyloliquefaciens FZB42 | ||||
|
Position: -294
Score: 80.77 Sequence: GGAAACGCACTAGGG...
Locus tag: RBAM_013090
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: RBAM_013080
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: RBAM_013070
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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| ykoE-ykoD-ykoC | -294 | 80.8 | GGAAACGCACTAGGG... | RBAM_013090 |
| Bacillus clausii KSM-K16 | ||||
|
Position: -200
Score: 74.06 Sequence: ACAACCACTAGGGGT...
Locus tag: ABC1933
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: ABC1934
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: ABC1935
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
||||
| ykoE-ykoD-ykoC | -200 | 74.1 | ACAACCACTAGGGGT... | ABC1933 |
| Bacillus licheniformis DSM 13 | ||||
|
Position: -217
Score: 86.0 Sequence: GGAAGTCCACTAGGG...
Locus tag: BLi04205
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: BLi04204
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BLi04203
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BLi04202
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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| tenA-ykoE-ykoD-ykoC | -217 | 86 | GGAAGTCCACTAGGG... | BLi04205 |
| Bacillus pumilus SAFR-032 | ||||
|
Position: -192
Score: 80.36 Sequence: AAAAGTCCACTAGGG...
Locus tag: BPUM_3574
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: BPUM_3573
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BPUM_3572
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BPUM_3571
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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| tenA-ykoE-ykoD-ykoC | -192 | 80.4 | AAAAGTCCACTAGGG... | BPUM_3574 |
| Bacillus subtilis subsp. subtilis str. 168 | ||||
|
Position: -210
Score: 74.93 Sequence: CGGAAAGCACTAGGG...
Locus tag: BSU13240
Name: ykoF Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13230
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13220
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: BSU13210
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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| ykoF-ykoE-ykoD-ykoC | -210 | 74.9 | CGGAAAGCACTAGGG... | BSU13240 |
| Geobacillus kaustophilus HTA426 | ||||
|
Position: -213
Score: 90.67 Sequence: TCATCCACTAGGGGG...
Locus tag: GK0618
Name: tenA Funciton: 4-amino-5-aminomethyl-2-methylpyrimidine hydrolase TenA
Locus tag: GK0619
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: GK0620
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: GK0621
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: GK0622
Name: tenI Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: GK0623
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: GK0624
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: GK0625
Name: thiG Funciton: Thiazole synthase ThiG
Locus tag: GK0626
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF |
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| tenA-ykoE-ykoD-ykoC-tenI-thiO-thiS-thiG-thiF | -213 | 90.7 | TCATCCACTAGGGGG... | GK0618 |
| Oceanobacillus iheyensis HTE831 | ||||
|
Position: -197
Score: 80.64 Sequence: TCGTACGCACTAGGG...
Locus tag: OB0806
Name: ykoF Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0805
Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0804
Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OB0803
Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine |
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| ykoF-ykoE-ykoD-ykoC | -197 | 80.6 | TCGTACGCACTAGGG... | OB0806 |