Orthologous regulated operons containing ykoD gene

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Staphylococcus aureus subsp. aureus N315
Position: -178 Score: 72.36 Sequence: TCGCACACACTAGGG... Locus tag: SA0929 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SA0928 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SA0927 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-178	72.4	TCGCACACACTAGGG...	SA0929
Staphylococcus capitis SK14
Position: -188 Score: 74.19 Sequence: GGACGCACTAGGGGT... Locus tag: STACA0001_2287 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: STACA0001_2288 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: STACA0001_2289 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-188	74.2	GGACGCACTAGGGGT...	STACA0001_2287
Staphylococcus carnosus subsp. carnosus TM300
Position: -209 Score: 77.25 Sequence: TAGAAAGCACTAGGG... Locus tag: Sca_0700 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: Sca_0699 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: Sca_0698 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-209	77.2	TAGAAAGCACTAGGG...	Sca_0700
Staphylococcus epidermidis ATCC 12228
Position: -188 Score: 69.71 Sequence: TTGAACGCACTAGGG... Locus tag: SE0775 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SE0774 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SE0773 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-188	69.7	TTGAACGCACTAGGG...	SE0775
Staphylococcus haemolyticus JCSC1435
Position: -185 Score: 77.09 Sequence: AAATGCACTAGGGGT... Locus tag: SH1880 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SH1881 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SH1882 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-185	77.1	AAATGCACTAGGGGT...	SH1880
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Position: -187 Score: 76.44 Sequence: ATTCGCACTAGGGGT... Locus tag: SSP1713 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SSP1714 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: SSP1715 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
ykoE-ykoD-ykoC	-187	76.4	ATTCGCACTAGGGGT...	SSP1713