Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiD gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -128
Score: 68.4
Sequence: TCAACGACTCGGGGT...
Locus tag: CKO_00680
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CKO_00681
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -128 68.4 TCAACGACTCGGGGT... CKO_00680
Edwardsiella tarda EIB202
Position: -130
Score: 69.55
Sequence: CAACTGACTCGGGGT...
Locus tag: ETAE_1058
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: ETAE_1059
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -130 69.6 CAACTGACTCGGGGT... ETAE_1058
Enterobacter sp. 638
Position: -133
Score: 70.12
Sequence: GTAATTTGACTCGGG...
Locus tag: Ent638_2711
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Ent638_2710
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -133 70.1 GTAATTTGACTCGGG... Ent638_2711
Erwinia amylovora ATCC 49946
Position: -137
Score: 68.36
Sequence: GACCAATGACTCGGG...
Locus tag: EAM_2193
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: EAM_2192
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -137 68.4 GACCAATGACTCGGG... EAM_2193
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -133
Score: 66.99
Sequence: AGTACATGACTCGGG...
Locus tag: ECA3197
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: ECA3196
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -133 67 AGTACATGACTCGGG... ECA3197
Escherichia coli str. K-12 substr. MG1655
Position: -132
Score: 65.83
Sequence: ACCAAACGACTCGGG...
Locus tag: b2104
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: b2103
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -132 65.8 ACCAAACGACTCGGG... b2104
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -133
Score: 66.58
Sequence: CTATTTTGACTCGGG...
Locus tag: KPN_02551
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: KPN_02550
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -133 66.6 CTATTTTGACTCGGG... KPN_02551
Proteus mirabilis HI4320
Position: -140
Score: 70.01
Sequence: AAGCTTTGGCTCGGG...
Locus tag: PMI1593
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiD -140 70 AAGCTTTGGCTCGGG... PMI1593
Salmonella typhimurium LT2
Position: -129
Score: 64.07
Sequence: GCTTGACGACTCGGG...
Locus tag: STM2147
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: STM2146
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -129 64.1 GCTTGACGACTCGGG... STM2147
Serratia proteamaculans 568
Position: -129
Score: 65.11
Sequence: ACCGTCTGACTCGGG...
Locus tag: Spro_3578
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Spro_3577
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiD -129 65.1 ACCGTCTGACTCGGG... Spro_3578
Yersinia pestis KIM
Position: -227
Score: 64.46
Sequence: ATTCTGACTCGGGGT...
Locus tag: y1373
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiD -227 64.5 ATTCTGACTCGGGGT... y1373
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