Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiF gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -194
Score: 72.03
Sequence: ACATCTTGTCGGAGT...
Locus tag: CKO_02992
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: CKO_02993
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CKO_02994
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: CKO_02995
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: CKO_02996
Name: thiG
Funciton: Thiazole synthase
Locus tag: CKO_02997
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -194 72 ACATCTTGTCGGAGT... CKO_02992
Enterobacter sp. 638
Position: -190
Score: 74.35
Sequence: AAATTTCTTGTCGGA...
Locus tag: Ent638_0207
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: Ent638_0206
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Ent638_0205
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Ent638_0204
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Ent638_0203
Name: thiG
Funciton: Thiazole synthase
Locus tag: Ent638_0202
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -190 74.3 AAATTTCTTGTCGGA... Ent638_0207
Erwinia amylovora ATCC 49946
Position: -147
Score: 62.93
Sequence: TAGTTCCTGTCAGGG...
Locus tag: EAM_P120
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: EAM_P119
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: EAM_P118
Name: thiG
Funciton: Thiazole synthase
Locus tag: EAM_P117
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
thiO-thiS-thiG-thiF -147 62.9 TAGTTCCTGTCAGGG... EAM_P120
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -253
Score: 69.11
Sequence: GCAAATCTTGTCGGA...
Locus tag: ECA0232
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: ECA0231
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: ECA0230
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: ECA0229A
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: ECA0229
Name: thiG
Funciton: Thiazole synthase
Locus tag: ECA0228
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -253 69.1 GCAAATCTTGTCGGA... ECA0232
Escherichia coli str. K-12 substr. MG1655
Position: -182
Score: 75.62
Sequence: TAATTTCTTGTCGGA...
Locus tag: b3994
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: b3993
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: b3992
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: b4407
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: b3991
Name: thiG
Funciton: Thiazole synthase
Locus tag: b3990
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -182 75.6 TAATTTCTTGTCGGA... b3994
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -211
Score: 74.31
Sequence: TTTCATCTTGTCGGA...
Locus tag: KPN_04376
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: KPN_04375
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: KPN_04374
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: KPN_04373
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: KPN_04372
Name: thiG
Funciton: Thiazole synthase
Locus tag: KPN_04371
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -211 74.3 TTTCATCTTGTCGGA... KPN_04376
Photorhabdus luminescens subsp. laumondii TTO1
Position: -245
Score: 72.96
Sequence: TACTTTCTTGTCGGA...
Locus tag: plu0486
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: plu0485
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: plu0484
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: plu0483
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: plu0482
Name: thiG
Funciton: Thiazole synthase
Locus tag: plu0481
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -245 73 TACTTTCTTGTCGGA... plu0486
Proteus mirabilis HI4320
Position: -253
Score: 71.06
Sequence: CATTCTTGTCGGAGT...
Locus tag: PMI2777
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: PMI2778
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: PMI2779
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: PMI2780
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: PMI2781
Name: thiG
Funciton: Thiazole synthase
Locus tag: PMI2782
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -253 71.1 CATTCTTGTCGGAGT... PMI2777
Salmonella typhimurium LT2
Position: -313
Score: 55.54
Sequence: GGTTATCTTGTCGGA...
Locus tag: STM4164
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: STM4163
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: STM4162
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: STM4161
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: STM4160
Name: thiG
Funciton: Thiazole synthase
Locus tag: STM4159
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -313 55.5 GGTTATCTTGTCGGA... STM4164
Serratia proteamaculans 568
Position: -241
Score: 71.5
Sequence: GGGCATCTTGTCGGA...
Locus tag: Spro_0284
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: Spro_0283
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Spro_0282
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Spro_0281
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Spro_0280
Name: thiG
Funciton: Thiazole synthase
Locus tag: Spro_0279
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiS-thiG-thiH -241 71.5 GGGCATCTTGTCGGA... Spro_0284
Yersinia pestis KIM
Position: -260
Score: 71.46
Sequence: AAGGCTCTTGTCGGA...
Locus tag: y0491
Name: thiC
Funciton: Phosphomethylpyrimidine synthase ThiC
Locus tag: y0490
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: y0489
Name: thiF
Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: y0488
Name: thiG
Funciton: Thiazole synthase
Locus tag: y0487
Name: thiH
Funciton: 2-iminoacetate synthase (EC 1.3.99.n2)
thiC-thiE-thiF-thiG-thiH -260 71.5 AAGGCTCTTGTCGGA... y0491
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