Orthologous regulated operons containing thiC gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -253
Score: 70.97 Sequence: CCAGCACTTGTCGGA...
Locus tag: Sama_1860
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sama_1859
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sama_1858
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sama_1857
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sama_1856
Name: thiG Funciton: Thiazole synthase
Locus tag: Sama_1855
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -253 | 71 | CCAGCACTTGTCGGA... | Sama_1860 |
| Shewanella denitrificans OS217 | ||||
|
Position: -384
Score: 76.33 Sequence: ACCTCTTGTCGGAGT...
Locus tag: Sden_1770
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sden_1771
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sden_1772
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sden_1773
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sden_1774
Name: thiG Funciton: Thiazole synthase
Locus tag: Sden_1775
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -384 | 76.3 | ACCTCTTGTCGGAGT... | Sden_1770 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -307
Score: 75.11 Sequence: TGACATCTTGTCGGA...
Locus tag: Sfri_2201
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sfri_2200
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sfri_2199
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sfri_2198
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sfri_2197
Name: thiG Funciton: Thiazole synthase
Locus tag: Sfri_2196
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -307 | 75.1 | TGACATCTTGTCGGA... | Sfri_2201 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -243
Score: 71.55 Sequence: TCATCTTGTCGGAGT...
Locus tag: Shal_1900
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shal_1901
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shal_1902
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shal_1903
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Shal_1904
Name: thiG Funciton: Thiazole synthase
Locus tag: Shal_1905
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -243 | 71.6 | TCATCTTGTCGGAGT... | Shal_1900 |
| Shewanella loihica PV-4 | ||||
|
Position: -277
Score: 68.05 Sequence: GCCCCTCTTGTCGGA...
Locus tag: Shew_2096
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shew_2095
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shew_2094
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shew_2093
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Shew_2092
Name: thiG Funciton: Thiazole synthase
Locus tag: Shew_2091
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -277 | 68.1 | GCCCCTCTTGTCGGA... | Shew_2096 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -261
Score: 72.88 Sequence: GGTCATCTTGTCGGA...
Locus tag: SO_2445
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: SO_2444
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: SO_2443
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: SO_2442
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: SO_2441
Name: thiG Funciton: Thiazole synthase
Locus tag: SO_2440
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -261 | 72.9 | GGTCATCTTGTCGGA... | SO_2445 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -246
Score: 70.97 Sequence: GCTCATCTTGTCGGA...
Locus tag: Spea_2383
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Spea_2382
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Spea_2381
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Spea_2380
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Spea_2379
Name: thiG Funciton: Thiazole synthase
Locus tag: Spea_2378
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -246 | 71 | GCTCATCTTGTCGGA... | Spea_2383 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -170
Score: 72.89 Sequence: TCATCTTGTCGGAGT...
Locus tag: swp_2330
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: swp_2331
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: swp_2332
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: swp_2333
Name: null Funciton: hypothetical protein swp_2333
Locus tag: swp_2334
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: swp_2335
Name: thiG Funciton: Thiazole synthase
Locus tag: swp_2336
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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| thiC-thiDE-thiF-swp_2333-thiS-thiG-thiH | -170 | 72.9 | TCATCTTGTCGGAGT... | swp_2330 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -298
Score: 72.71 Sequence: TCATCTTGTCGGAGT...
Locus tag: Sputcn32_1922
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sputcn32_1923
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sputcn32_1924
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sputcn32_1925
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sputcn32_1926
Name: thiG Funciton: Thiazole synthase
Locus tag: Sputcn32_1927
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -298 | 72.7 | TCATCTTGTCGGAGT... | Sputcn32_1922 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -298
Score: 70.21 Sequence: ACATCTTGTCGGAGT...
Locus tag: Ssed_2013
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Ssed_2014
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Ssed_2015
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Ssed_2016
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Ssed_2017
Name: thiG Funciton: Thiazole synthase
Locus tag: Ssed_2018
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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| thiC-thiDE-thiF-thiS-thiG-thiH | -298 | 70.2 | ACATCTTGTCGGAGT... | Ssed_2013 |
| Shewanella sp ANA-3 | ||||
|
Position: -257
Score: 72.55 Sequence: CCATCTTGTCGGAGT...
Locus tag: Shewana3_1936
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewana3_1937
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewana3_1938
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewana3_1939
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Shewana3_1940
Name: thiG Funciton: Thiazole synthase
Locus tag: Shewana3_1941
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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| thiC-thiDE-thiF-thiS-thiG-thiH | -257 | 72.6 | CCATCTTGTCGGAGT... | Shewana3_1936 |
| Shewanella sp MR-4 | ||||
|
Position: -256
Score: 72.55 Sequence: CCATCTTGTCGGAGT...
Locus tag: Shewmr4_1881
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewmr4_1882
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewmr4_1883
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewmr4_1884
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Shewmr4_1885
Name: thiG Funciton: Thiazole synthase
Locus tag: Shewmr4_1886
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -256 | 72.6 | CCATCTTGTCGGAGT... | Shewmr4_1881 |
| Shewanella sp MR-7 | ||||
|
Position: -258
Score: 72.55 Sequence: GCCCATCTTGTCGGA...
Locus tag: Shewmr7_2097
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Shewmr7_2096
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Shewmr7_2095
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Shewmr7_2094
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Shewmr7_2093
Name: thiG Funciton: Thiazole synthase
Locus tag: Shewmr7_2092
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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| thiC-thiDE-thiF-thiS-thiG-thiH | -258 | 72.6 | GCCCATCTTGTCGGA... | Shewmr7_2097 |
| Shewanella sp W3-18-1 | ||||
|
Position: -300
Score: 75.1 Sequence: ACTCATCTTGTCGGA...
Locus tag: Sputw3181_2086
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Sputw3181_2085
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Sputw3181_2084
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Sputw3181_2083
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Sputw3181_2082
Name: thiG Funciton: Thiazole synthase
Locus tag: Sputw3181_2081
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
||||
| thiC-thiDE-thiF-thiS-thiG-thiH | -300 | 75.1 | ACTCATCTTGTCGGA... | Sputw3181_2086 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -243
Score: 76.33 Sequence: TGGCATCTTGTCGGA...
Locus tag: Swoo_2592
Name: thiC Funciton: Phosphomethylpyrimidine synthase
Locus tag: Swoo_2591
Name: thiDE Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Swoo_2590
Name: thiF Funciton: Sulfur carrier protein adenylyltransferase ThiF
Locus tag: Swoo_2589
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Swoo_2588
Name: thiG Funciton: Thiazole synthase
Locus tag: Swoo_2587
Name: thiH Funciton: 2-iminoacetate synthase (EC 1.3.99.n2) |
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| thiC-thiDE-thiF-thiS-thiG-thiH | -243 | 76.3 | TGGCATCTTGTCGGA... | Swoo_2592 |