Orthologous regulated operons containing ribBA gene
Regulator type: | RNA regulatory element |
Name: | FMN |
RFAM: | RF00050 |
Regulation mode: | |
Biological process: | Riboflavin biosynthesis |
Effector: | Flavin mononucleotide |
Phylum: | Firmicutes |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Macrococcus caseolyticus JCSC5402 | ||||
Position: -138
Score: 112.41 Sequence: AGGACACCATTAAGC...
Locus tag: MCCL_1455
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: MCCL_1454
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: MCCL_1453
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: MCCL_1452
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -138 | 112.4 | AGGACACCATTAAGC... | MCCL_1455 |
Staphylococcus aureus subsp. aureus N315 | ||||
Position: -128
Score: 123.35 Sequence: GTTAATTATCGACAA...
Locus tag: SA1589
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SA1588
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SA1587
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SA1586
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -128 | 123.3 | GTTAATTATCGACAA... | SA1589 |
Staphylococcus capitis SK14 | ||||
Position: -134
Score: 119.23 Sequence: ATAATTACTCGACAA...
Locus tag: STACA0001_0662
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: STACA0001_0661
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: STACA0001_0660
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: STACA0001_0659
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -134 | 119.2 | ATAATTACTCGACAA... | STACA0001_0662 |
Staphylococcus carnosus subsp. carnosus TM300 | ||||
Position: -176
Score: 124.43 Sequence: GAAGACGTCATTAAA...
Locus tag: Sca_1375
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Sca_1374
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Sca_1373
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Sca_1372
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -176 | 124.4 | GAAGACGTCATTAAA... | Sca_1375 |
Staphylococcus epidermidis ATCC 12228 | ||||
Position: -151
Score: 115.42 Sequence: TTGAATTATCGACTT...
Locus tag: SE1441
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SE1440
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SE1439
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SE1438
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -151 | 115.4 | TTGAATTATCGACTT... | SE1441 |
Staphylococcus haemolyticus JCSC1435 | ||||
Position: -280
Score: 115.43 Sequence: AATTCTTTCGGGGCG...
Locus tag: SH1153
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SH1154
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SH1155
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SH1156
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -280 | 115.4 | AATTCTTTCGGGGCG... | SH1153 |
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | ||||
Position: -293
Score: 124.96 Sequence: TATTCTTTCGGGGCA...
Locus tag: SSP0995
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: SSP0996
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: SSP0997
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: SSP0998
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
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ribD-ribE-ribBA-ribH | -293 | 125 | TATTCTTTCGGGGCA... | SSP0995 |