Orthologous regulated operons containing ribB gene
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -208
Score: 66.64 Sequence: ATCCCTGTCAGCCAG...
Locus tag: Sama_0143
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -208 | 66.6 | ATCCCTGTCAGCCAG... | Sama_0143 |
| Shewanella baltica OS155 | ||||
|
Position: -420
Score: 52.64 Sequence: CAAATTCTCAGGGCG...
Locus tag: Sbal_4219
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
||||
| ribB | -420 | 52.6 | CAAATTCTCAGGGCG... | Sbal_4219 |
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -263
Score: 113.09 Sequence: ATAATTCTCAGGGCG...
Locus tag: Sfri_3868
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
||||
| ribB | -263 | 113.1 | ATAATTCTCAGGGCG... | Sfri_3868 |
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -432
Score: 46.29 Sequence: ATAATTCTCAGGGCG...
Locus tag: Shal_4187
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
||||
| ribB | -432 | 46.3 | ATAATTCTCAGGGCG... | Shal_4187 |
| Shewanella loihica PV-4 | ||||
|
Position: -368
Score: 89.17 Sequence: TACATTCTCAGGGCG...
Locus tag: Shew_0040
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
||||
| ribB | -368 | 89.2 | TACATTCTCAGGGCG... | Shew_0040 |
| Shewanella oneidensis MR-1 | ||||
|
Position: -239
Score: 43.22 Sequence: TTTGCCACTAGCGAC...
Locus tag: SO_0142
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -239 | 43.2 | TTTGCCACTAGCGAC... | SO_0142 |
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -306
Score: 46.57 Sequence: TAACTAGGGTCAGCA...
Locus tag: Spea_0131
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -306 | 46.6 | TAACTAGGGTCAGCA... | Spea_0131 |
| Shewanella piezotolerans WP3 | ||||
|
Position: -242
Score: 45.88 Sequence: TGCTGCGCACTATGT...
Locus tag: swp_0169
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -242 | 45.9 | TGCTGCGCACTATGT... | swp_0169 |
| Shewanella putrefaciens CN-32 | ||||
|
Position: -229
Score: 49.47 Sequence: TGGCAACAGTGCTGA...
Locus tag: Sputcn32_0134
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -229 | 49.5 | TGGCAACAGTGCTGA... | Sputcn32_0134 |
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -455
Score: 44.4 Sequence: TAAATTCTCAGGGCG...
Locus tag: Ssed_4372
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -455 | 44.4 | TAAATTCTCAGGGCG... | Ssed_4372 |
| Shewanella sp ANA-3 | ||||
|
Position: -303
Score: 42.23 Sequence: ATGCCTATCGAGCGC...
Locus tag: Shewana3_0134
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -303 | 42.2 | ATGCCTATCGAGCGC... | Shewana3_0134 |
| Shewanella sp MR-4 | ||||
|
Position: -323
Score: 39.2 Sequence: GCTTGTCTCGTTATG...
Locus tag: Shewmr4_0135
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -323 | 39.2 | GCTTGTCTCGTTATG... | Shewmr4_0135 |
| Shewanella sp MR-7 | ||||
|
Position: -259
Score: 41.92 Sequence: TTTGCCAGCATAGCA...
Locus tag: Shewmr7_0129
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -259 | 41.9 | TTTGCCAGCATAGCA... | Shewmr7_0129 |
| Shewanella sp W3-18-1 | ||||
|
Position: -397
Score: 24.76 Sequence: GAAACTCCCCACCGG...
Locus tag: Sputw3181_3938
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -397 | 24.8 | GAAACTCCCCACCGG... | Sputw3181_3938 |
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -401
Score: 52.69 Sequence: TAAATTCTCAGGGCG...
Locus tag: Swoo_4764
Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| ribB | -401 | 52.7 | TAAATTCTCAGGGCG... | Swoo_4764 |