Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribB gene

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -208
Score: 66.64
Sequence: ATCCCTGTCAGCCAG...
Locus tag: Sama_0143
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -208 66.6 ATCCCTGTCAGCCAG... Sama_0143
Shewanella baltica OS155
Position: -420
Score: 52.64
Sequence: CAAATTCTCAGGGCG...
Locus tag: Sbal_4219
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -420 52.6 CAAATTCTCAGGGCG... Sbal_4219
Shewanella frigidimarina NCIMB 400
Position: -263
Score: 113.09
Sequence: ATAATTCTCAGGGCG...
Locus tag: Sfri_3868
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -263 113.1 ATAATTCTCAGGGCG... Sfri_3868
Shewanella halifaxensis HAW-EB4
Position: -432
Score: 46.29
Sequence: ATAATTCTCAGGGCG...
Locus tag: Shal_4187
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -432 46.3 ATAATTCTCAGGGCG... Shal_4187
Shewanella loihica PV-4
Position: -368
Score: 89.17
Sequence: TACATTCTCAGGGCG...
Locus tag: Shew_0040
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -368 89.2 TACATTCTCAGGGCG... Shew_0040
Shewanella oneidensis MR-1
Position: -239
Score: 43.22
Sequence: TTTGCCACTAGCGAC...
Locus tag: SO_0142
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -239 43.2 TTTGCCACTAGCGAC... SO_0142
Shewanella pealeana ATCC 700345
Position: -306
Score: 46.57
Sequence: TAACTAGGGTCAGCA...
Locus tag: Spea_0131
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -306 46.6 TAACTAGGGTCAGCA... Spea_0131
Shewanella piezotolerans WP3
Position: -242
Score: 45.88
Sequence: TGCTGCGCACTATGT...
Locus tag: swp_0169
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -242 45.9 TGCTGCGCACTATGT... swp_0169
Shewanella putrefaciens CN-32
Position: -229
Score: 49.47
Sequence: TGGCAACAGTGCTGA...
Locus tag: Sputcn32_0134
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -229 49.5 TGGCAACAGTGCTGA... Sputcn32_0134
Shewanella sediminis HAW-EB3
Position: -455
Score: 44.4
Sequence: TAAATTCTCAGGGCG...
Locus tag: Ssed_4372
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -455 44.4 TAAATTCTCAGGGCG... Ssed_4372
Shewanella sp ANA-3
Position: -303
Score: 42.23
Sequence: ATGCCTATCGAGCGC...
Locus tag: Shewana3_0134
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -303 42.2 ATGCCTATCGAGCGC... Shewana3_0134
Shewanella sp MR-4
Position: -323
Score: 39.2
Sequence: GCTTGTCTCGTTATG...
Locus tag: Shewmr4_0135
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -323 39.2 GCTTGTCTCGTTATG... Shewmr4_0135
Shewanella sp MR-7
Position: -259
Score: 41.92
Sequence: TTTGCCAGCATAGCA...
Locus tag: Shewmr7_0129
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -259 41.9 TTTGCCAGCATAGCA... Shewmr7_0129
Shewanella sp W3-18-1
Position: -397
Score: 24.76
Sequence: GAAACTCCCCACCGG...
Locus tag: Sputw3181_3938
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -397 24.8 GAAACTCCCCACCGG... Sputw3181_3938
Shewanella woodyi ATCC 51908
Position: -401
Score: 52.69
Sequence: TAAATTCTCAGGGCG...
Locus tag: Swoo_4764
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribB -401 52.7 TAAATTCTCAGGGCG... Swoo_4764