Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yddB gene

Properties
Regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Built upon 656 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -269
Score: 4.37
Sequence: TAAAACGATTATCATTTGT
Position: -263
Score: 4.07
Sequence: GATTATCATTTGTATTATT
Locus tag: ECA0877
Name: null
Funciton: TonB-like protein
Locus tag: ECA0878
Name: yddB
Funciton: TonB-dependent receptor
ECA0877-yddB -269 4.4 TAAAACGATTATCATTTGT ECA0877
-263 4.1 GATTATCATTTGTATTATT
Escherichia coli str. K-12 substr. MG1655
Position: -4
Score: 4.45
Sequence: GCTAATGATAACCATTCCC
Locus tag: b1496
Name: yddA
Funciton: fused predicted multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component
Locus tag: b1495
Name: yddB
Funciton: TonB-dependent receptor
yddA-yddB -4 4.4 GCTAATGATAACCATTCCC b1496
Proteus mirabilis HI4320
Position: -115
Score: 4.21
Sequence: GATATTGCTTATTATTAAT
Position: -75
Score: 4.19
Sequence: AATATTGATTATAAAAATT
Locus tag: PMI3708
Name: null
Funciton: ECF-family sigma factor
Locus tag: PMI3707
Name: null
Funciton: FecR-like transcriptional regulator
Locus tag: PMI3706
Name: yddB
Funciton: TonB-dependent receptor
PMI3708-PMI3707-yddB -115 4.2 GATATTGCTTATTATTAAT PMI3708
-75 4.2 AATATTGATTATAAAAATT
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