Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing csgF gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -207
Score: 4.06816
Sequence: TTTTGTTACAAGTTTAACACTT
Locus tag: CKO_02029
Name: csgD
Funciton: DNA-binding transcriptional activator in two-component regulatory system
Locus tag: CKO_02030
Name: csgE
Funciton: hypothetical protein
Locus tag: CKO_02031
Name: csgF
Funciton: hypothetical protein
csgD-csgE-csgF -207 4.1 TTTTGTTACAAGTTTAACACTT CKO_02029
Escherichia coli str. K-12 substr. MG1655
Position: -201
Score: 3.8657
Sequence: TTTAGTTACATGTTTAACACTT
Position: -134
Score: 3.33076
Sequence: TAGTTTTATATTTTACCCATTT
Locus tag: b1040
Name: csgD
Funciton: DNA-binding transcriptional activator in two-component regulatory system
Locus tag: b1039
Name: csgE
Funciton: hypothetical protein
Locus tag: b1038
Name: csgF
Funciton: hypothetical protein
Locus tag: b1037
Name: csgG
Funciton: outer membrane lipoprotein
csgD-csgE-csgF-csgG -201 3.9 TTTAGTTACATGTTTAACACTT b1040
-134 3.3 TAGTTTTATATTTTACCCATTT
Salmonella typhimurium LT2
Position: -202
Score: 3.44759
Sequence: TTTGGTTACAAGTTTAACACTT
Locus tag: STM1142
Name: csgD
Funciton: DNA-binding transcriptional activator in two-component regulatory system
Locus tag: STM1141
Name: csgE
Funciton: hypothetical protein
Locus tag: STM1140
Name: csgF
Funciton: hypothetical protein
csgD-csgE-csgF -202 3.4 TTTGGTTACAAGTTTAACACTT STM1142
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