Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ppdD gene

Properties
Regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Built upon 2301 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -146
Score: 3.42828
Sequence: TTTTTCGAGCGGCCTCGCAAAC
Locus tag: CKO_03268
Name: ppdD
Funciton: predicted major pilin subunit
Locus tag: CKO_03269
Name: pulE
Funciton: conserved protein with nucleoside triphosphate hydrolase domain
ppdD-pulE -146 3.4 TTTTTCGAGCGGCCTCGCAAAC CKO_03268
Escherichia coli str. K-12 substr. MG1655
Position: -145
Score: 3.24937
Sequence: CTTCGTAACGCCTCGCAAATTT
Locus tag: b0108
Name: ppdD
Funciton: predicted major pilin subunit
Locus tag: b0107
Name: pulE
Funciton: conserved protein with nucleoside triphosphate hydrolase domain
ppdD-pulE -145 3.2 CTTCGTAACGCCTCGCAAATTT b0108
Proteus mirabilis HI4320
Position: -146
Score: 4.2507
Sequence: TAATGCGAACTTGCTCTCAATA
Locus tag: PMI2049
Name: ppdD
Funciton: predicted major pilin subunit
Locus tag: PMI2050
Name: pulE
Funciton: conserved protein with nucleoside triphosphate hydrolase domain
ppdD-pulE -146 4.3 TAATGCGAACTTGCTCTCAATA PMI2049
Yersinia pestis KIM
Position: -123
Score: 3.80246
Sequence: TTACGTTATTGCAATAACCTAA
Locus tag: y0761
Name: ppdD
Funciton: predicted major pilin subunit
Locus tag: y0760
Name: pulE
Funciton: conserved protein with nucleoside triphosphate hydrolase domain
ppdD-pulE -123 3.8 TTACGTTATTGCAATAACCTAA y0761
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