Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG1242 gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria/Delta
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Geobacter lovleyi SZ
Position: -154
Score: 78.55
Sequence: TAAACCGCTAGGGGA...
Locus tag: Glov_0035
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: Glov_0036
Name: thiG
Funciton: Thiazole synthase
Locus tag: Glov_0037
Name: thiE
Funciton: Thiamine monophosphate synthase
Locus tag: Glov_0038
Name: COG1242
Funciton: Predicted Fe-S oxidoreductase
thiS-thiG-thiE-COG1242 -154 78.6 TAAACCGCTAGGGGA... Glov_0035
Geobacter metallireducens GS-15
Position: -99
Score: 72.26
Sequence: CAACTCGCTAGGGGA...
Locus tag: Gmet_2933
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: Gmet_2934
Name: thiG
Funciton: Thiazole synthase
Locus tag: Gmet_2935
Name: thiE
Funciton: Thiamine monophosphate synthase
Locus tag: Gmet_2936
Name: COG1242
Funciton: Predicted Fe-S oxidoreductase
thiS-thiG-thiE-COG1242 -99 72.3 CAACTCGCTAGGGGA... Gmet_2933
Geobacter sulfurreducens PCA
Position: -227
Score: 60.03
Sequence: ATCGAACCGCTAGGG...
Locus tag: GSU0589
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: GSU0588
Name: thiG
Funciton: Thiazole synthase
Locus tag: GSU0587
Name: thiE
Funciton: Thiamine monophosphate synthase
Locus tag: GSU0586
Name: COG1242
Funciton: Predicted Fe-S oxidoreductase
thiS-thiG-thiE-COG1242 -227 60 ATCGAACCGCTAGGG... GSU0589
Geobacter uraniumreducens Rf4
Position: -177
Score: 72.56
Sequence: TACATCGCTGGGGGA...
Locus tag: Gura_3658
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: Gura_3659
Name: thiG
Funciton: Thiazole synthase
Locus tag: Gura_3660
Name: thiE
Funciton: Thiamine monophosphate synthase
Locus tag: Gura_3661
Name: COG1242
Funciton: Predicted Fe-S oxidoreductase
thiS-thiG-thiE-COG1242 -177 72.6 TACATCGCTGGGGGA... Gura_3658
Pelobacter propionicus DSM 2379
Position: -146
Score: 72.11
Sequence: AAAAACGCTGGGGGA...
Locus tag: Ppro_3474
Name: thiS
Funciton: Thiamine biosynthesis protein ThiS
Locus tag: Ppro_3475
Name: thiG
Funciton: Thiazole synthase
Locus tag: Ppro_3476
Name: thiE
Funciton: Thiamine monophosphate synthase
Locus tag: Ppro_3477
Name: COG1242
Funciton: Predicted Fe-S oxidoreductase
thiS-thiG-thiE-COG1242 -146 72.1 AAAAACGCTGGGGGA... Ppro_3474