Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiM gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridiales bacterium 1_7_47_FAA
Position: -179
Score: 59.65
Sequence: CTAAGTAACAGCAGG...
Locus tag: Cbac1_010100012906
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: Cbac1_010100012901
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Cbac1_010100012896
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiW-thiM-thiE -179 59.7 CTAAGTAACAGCAGG... Cbac1_010100012906
Clostridium bolteae ATCC BAA-613
Position: -118
Score: 60.62
Sequence: CTAAATGACAACAGG...
Locus tag: CLOBOL_04495
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLOBOL_04494
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
thiW-thiM -118 60.6 CTAAATGACAACAGG... CLOBOL_04495
Clostridium nexile DSM 1787
Position: -166
Score: 66.31
Sequence: CAAAAACATAGGGGA...
Locus tag: CLONEX_00816
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
Locus tag: CLONEX_00817
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: CLONEX_00818
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: CLONEX_00819
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLONEX_00820
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiW-thiM-thiE-thiD-thiC -166 66.3 CAAAAACATAGGGGA... CLONEX_00816
Dorea formicigenerans ATCC 27755
Position: -166
Score: 48.84
Sequence: ACAACAGGGGGCTTG...
Locus tag: DORFOR_02060
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: DORFOR_02061
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: DORFOR_02062
Name: COG0637
Funciton: hypothetical phosphatase/hydrolase
Locus tag: DORFOR_02063
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: DORFOR_02064
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
thiM-thiE-COG0637-thiD-cytX -166 48.8 ACAACAGGGGGCTTG... DORFOR_02060
Dorea longicatena DSM 13814
Position: -280
Score: 36.42
Sequence: GAAAAGGGGAGTCCG...
Locus tag: DORLON_02556
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: DORLON_02557
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: DORLON_02558
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-thiD -280 36.4 GAAAAGGGGAGTCCG... DORLON_02556
Eubacterium rectale ATCC 33656
Position: -163
Score: 46.82
Sequence: AAAAACACAACAGGG...
Locus tag: EUBREC_2530
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: EUBREC_2529
Name: null
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiM-EUBREC_2529 -163 46.8 AAAAACACAACAGGG... EUBREC_2530
Ruminococcus gnavus ATCC 29149
Position: -201
Score: 47.58
Sequence: AAATAAAAAACAAGG...
Locus tag: RUMGNA_01198
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: RUMGNA_01197
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: RUMGNA_01196
Name: PF00702
Funciton: Haloacid dehalogenase-like hydrolase
Locus tag: RUMGNA_01195
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-PF00702-thiD -201 47.6 AAATAAAAAACAAGG... RUMGNA_01198
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