Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiD gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides pectinophilus ATCC 43243
Position: -226
Score: 65.85
Sequence: TATACAGAATTTGGG...
Locus tag: BACPEC_01112
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: BACPEC_01111
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiC-thiD -226 65.8 TATACAGAATTTGGG... BACPEC_01112
Blautia hansenii DSM 20583
Position: -151
Score: 67.5
Sequence: TTAAAGTCAGCAGGG...
Locus tag: BLAHAN_02471
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: BLAHAN_02470
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiE-thiD -151 67.5 TTAAAGTCAGCAGGG... BLAHAN_02471
Clostridiales bacterium 1_7_47_FAA
Position: -255
Score: 51.06
Sequence: TAAATAGACAACGGG...
Locus tag: Cbac1_010100007113
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Cbac1_010100007108
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
thiD-cytX -255 51.1 TAAATAGACAACGGG... Cbac1_010100007113
Clostridium bolteae ATCC BAA-613
Position: -253
Score: 51.79
Sequence: TTGTAAATAAACGGG...
Locus tag: CLOBOL_02869
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLOBOL_02868
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
thiD-cytX -253 51.8 TTGTAAATAAACGGG... CLOBOL_02869
Clostridium nexile DSM 1787
Position: -323
Score: 70.88
Sequence: TACTCAAGCAGGGGG...
Position: -163
Score: 49.66
Sequence: TGTGTTTGCGAGGGA...
Locus tag: CLONEX_00625
Name: tenA
Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: CLONEX_00626
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: CLONEX_00627
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
tenA-thiD-thiE -323 70.9 TACTCAAGCAGGGGG... CLONEX_00625
-163 49.7 TGTGTTTGCGAGGGA...
Dorea formicigenerans ATCC 27755
Position: -166
Score: 48.84
Sequence: ACAACAGGGGGCTTG...
Locus tag: DORFOR_02060
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: DORFOR_02061
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: DORFOR_02062
Name: COG0637
Funciton: hypothetical phosphatase/hydrolase
Locus tag: DORFOR_02063
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: DORFOR_02064
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
thiM-thiE-COG0637-thiD-cytX -166 48.8 ACAACAGGGGGCTTG... DORFOR_02060
Dorea longicatena DSM 13814
Position: -280
Score: 36.42
Sequence: GAAAAGGGGAGTCCG...
Locus tag: DORLON_02556
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: DORLON_02557
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: DORLON_02558
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-thiD -280 36.4 GAAAAGGGGAGTCCG... DORLON_02556
Roseburia intestinalis L1-82
Position: -250
Score: 51.57
Sequence: AACAAAAAATGGGGT...
Locus tag: ROSINTL182_02417
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: ROSINTL182_02416
Name: cytX
Funciton: Predicted hydroxymethylpyrimidine transporter CytX
Locus tag: ROSINTL182_02415
Name: thiW
Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter
thiD-cytX-thiW -250 51.6 AACAAAAAATGGGGT... ROSINTL182_02417
Ruminococcus gnavus ATCC 29149
Position: -201
Score: 47.58
Sequence: AAATAAAAAACAAGG...
Locus tag: RUMGNA_01198
Name: thiM
Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: RUMGNA_01197
Name: thiE
Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: RUMGNA_01196
Name: PF00702
Funciton: Haloacid dehalogenase-like hydrolase
Locus tag: RUMGNA_01195
Name: thiD
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
thiM-thiE-PF00702-thiD -201 47.6 AAATAAAAAACAAGG... RUMGNA_01198
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