Orthologous regulated operons containing omp_thi gene

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Alteromonas macleodii 'Deep ecotype'
Position: -160 Score: 73.76 Sequence: ACGCTATACCAAGGG... Locus tag: MADE_02805 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: MADE_02804 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: MADE_02803 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: MADE_02802 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi-ykoF-pnuT-PF01636	-160	73.8	ACGCTATACCAAGGG...	MADE_02805
Colwellia psychrerythraea 34H
Position: -469 Score: 22.93 Sequence: GCGTTGAACCAAGGG... Locus tag: CPS_0067 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: CPS_0066 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: CPS_0065 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: CPS_0064 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi-ykoF-pnuT-PF01636	-469	22.9	GCGTTGAACCAAGGG...	CPS_0067
Glaciecola sp. HTCC2999
Position: -154 Score: 61.03 Sequence: CAGCGTCCAAGGGGT... Locus tag: GHTCC_010100011239 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent
omp_thi	-154	61	CAGCGTCCAAGGGGT...	GHTCC_010100011239
Idiomarina baltica OS145
Position: -184 Score: 72.31 Sequence: CCCGAGTACCAAGGG... Locus tag: OS145_08472 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: OS145_08467 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: OS145_08462 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: OS145_08457 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi-ykoF-pnuT-PF01636	-184	72.3	CCCGAGTACCAAGGG...	OS145_08472
Idiomarina loihiensis L2TR
Position: -149 Score: 73.79 Sequence: CCGCTTTACCAAGGG... Locus tag: IL2358 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: IL2357 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: IL2356 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: IL2355 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi-ykoF-pnuT-PF01636	-149	73.8	CCGCTTTACCAAGGG...	IL2358
Pseudoalteromonas atlantica T6c
Position: -178 Score: 63.61 Sequence: TAACTACCAAGGGGT... Locus tag: Patl_1344 Name: omp_thi Funciton: predicted thiamin-specific outer membrane transporter, TonB-dependent Locus tag: Patl_1345 Name: ykoF Funciton: Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Locus tag: Patl_1346 Name: pnuT Funciton: Predicted thiamin transporter PnuT Locus tag: Patl_1347 Name: PF01636 Funciton: Putative thiamine kinase, PnuT-associated, THI-regulated
omp_thi-ykoF-pnuT-PF01636	-178	63.6	TAACTACCAAGGGGT...	Patl_1344