Orthologous regulated operons containing ribD gene
| Regulator type: | RNA regulatory element |
| Name: | FMN |
| RFAM: | RF00050 |
| Regulation mode: | |
| Biological process: | Riboflavin biosynthesis |
| Effector: | Flavin mononucleotide |
| Phylum: | Firmicutes |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Anaerocellum thermophilum DSM 6725 | ||||
|
Position: -252
Score: 114.52 Sequence: GTCCATCCTTCGGGG...
Locus tag: Athe_0564
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Athe_0563
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Athe_0562
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Athe_0561
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -252 | 114.5 | GTCCATCCTTCGGGG... | Athe_0564 |
| Caldicellulosiruptor saccharolyticus DSM 8903 | ||||
|
Position: -248
Score: 114.94 Sequence: GTCCATCCTTCGGGG...
Locus tag: Csac_0794
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Csac_0793
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Csac_0792
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Csac_0791
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -248 | 114.9 | GTCCATCCTTCGGGG... | Csac_0794 |
| Carboxydothermus hydrogenoformans Z-2901 | ||||
|
Position: -196
Score: 119.85 Sequence: TTACTACCTTCGGGG...
Locus tag: CHY_1475
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CHY_1474
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CHY_1473
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CHY_1472
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -196 | 119.8 | TTACTACCTTCGGGG... | CHY_1475 |
| Moorella thermoacetica ATCC 39073 | ||||
|
Position: -273
Score: 115.07 Sequence: ACGTCCTTCGGGGTT...
Locus tag: Moth_0915
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Moth_0916
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Moth_0917
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25) |
||||
| ribD-ribE-ribBA | -273 | 115.1 | ACGTCCTTCGGGGTT... | Moth_0915 |
| Thermoanaerobacter ethanolicus X514 | ||||
|
Position: -199
Score: 113.69 Sequence: AAAACCTTCAGGGAT...
Locus tag: Teth514_0020
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Teth514_0021
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Teth514_0022
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Teth514_0023
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -199 | 113.7 | AAAACCTTCAGGGAT... | Teth514_0020 |
| Thermoanaerobacter italicus Ab9 | ||||
|
Position: -198
Score: 113.69 Sequence: AAAACCTTCAGGGAT...
Locus tag: Thit_0021
Name: ribD Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Thit_0022
Name: ribE Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Thit_0023
Name: ribBA Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Thit_0024
Name: ribH Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) |
||||
| ribD-ribE-ribBA-ribH | -198 | 113.7 | AAAACCTTCAGGGAT... | Thit_0021 |