Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing IF17 gene

Properties
Regulator type: RNA regulatory element
Name: glnA
RFAM: RF01739
Regulation mode:
Biological process: Nitrogen assimilation
Effector: L-glutamine
Phylum: Cyanobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -117
Score: 50.02
Sequence: AATCGTTCATCCTTT...
Locus tag: cce_2638
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -117 50 AATCGTTCATCCTTT... cce_2638
Cyanothece sp. PCC 7425
Position: -132
Score: 49.29
Sequence: GATCGTTCATCTCTC...
Locus tag: Cyan7425_1393
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -132 49.3 GATCGTTCATCTCTC... Cyan7425_1393
Synechococcus elongatus PCC 7942
Position: -94
Score: 41.57
Sequence: AATCGTTGGCCCAGT...
Locus tag: Synpcc7942_2529
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -94 41.6 AATCGTTGGCCCAGT... Synpcc7942_2529
Synechococcus sp. JA-3-3Ab
Position: -188
Score: 48.9
Sequence: AATCGTTCATCCTCT...
Locus tag: CYA_0922
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -188 48.9 AATCGTTCATCCTCT... CYA_0922
Synechocystis sp. PCC 6803
Position: -96
Score: 56.22
Sequence: AATCGTTCATCTTCT...
Locus tag: sll1515
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -96 56.2 AATCGTTCATCTTCT... sll1515
Thermosynechococcus elongatus BP-1
Position: -124
Score: 49.82
Sequence: AATCGTTCATCTTCG...
Locus tag: tll1670 (deprecated)
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -124 49.8 AATCGTTCATCTTCG... tll1670 (deprecated)
Trichodesmium erythraeum IMS101
Position: -86
Score: 39.73
Sequence: AAGCGTTCATCTTCT...
Locus tag: Tery_3029
Name: IF17
Funciton: Glutamine synthetase inactivating factor IF17
IF17 -86 39.7 AAGCGTTCATCTTCT... Tery_3029
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