Orthologous regulated operons containing thiF gene
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Oceanicola batsensis HTCC2597 | ||||
|
Position: -172
Score: 70.8 Sequence: GCAGAATCCGTTGGG...
Locus tag: OB2597_02767
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: OB2597_02762
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: OB2597_02757
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: OB2597_02752
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: OB2597_02747
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: OB2597_02742
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: OB2597_02737
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: OB2597_02732
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: OB2597_02727
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: OB2597_02722
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
||||
| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA-thiZ-thiX | -172 | 70.8 | GCAGAATCCGTTGGG... | OB2597_02767 |
| Paracoccus denitrificans PD1222 | ||||
|
Position: -145
Score: 82.38 Sequence: ACTCATACACTTGGG...
Locus tag: Pden_0042
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Pden_0041
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Pden_0040
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Pden_0039
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Pden_0038
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Pden_0037
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: Pden_0036
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Pden_0035
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Pden_0034
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: Pden_0033
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
||||
| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA-thiZ-thiX | -145 | 82.4 | ACTCATACACTTGGG... | Pden_0042 |
| Roseobacter sp. MED193 | ||||
|
Position: -246
Score: 49.92 Sequence: TAGCCTACGCAGGGG...
Locus tag: MED193_07728
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: MED193_07733
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: MED193_07738
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: MED193_07743
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: MED193_07748
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: MED193_07753
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: MED193_07758
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiC-thiO-thiS-thiG-thiE-thiF-thiD | -246 | 49.9 | TAGCCTACGCAGGGG... | MED193_07728 |
| Roseovarius nubinhibens ISM | ||||
|
Position: -223
Score: 52.15 Sequence: ATTGCACGCAGGGGG...
Locus tag: ISM_10621
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: ISM_10626
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: ISM_10631
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: ISM_10636
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: ISM_10641
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: ISM_10646
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: ISM_10651
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
||||
| thiC-thiO-thiS-thiG-thiE-thiF-thiD | -223 | 52.2 | ATTGCACGCAGGGGG... | ISM_10621 |
| Roseovarius sp. 217 | ||||
|
Position: -148
Score: 80.71 Sequence: GCAACATCCGTTGGG...
Locus tag: ROS217_09305
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: ROS217_09300
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: ROS217_09295
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: ROS217_09290
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: ROS217_09285
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: ROS217_09280
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: ROS217_09275
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: ROS217_09270
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
||||
| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA | -148 | 80.7 | GCAACATCCGTTGGG... | ROS217_09305 |
| Silicibacter TM1040 | ||||
|
Position: -146
Score: 79.43 Sequence: GCGAACCGTTGGGGT...
Locus tag: TM1040_3649
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: TM1040_3650
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: TM1040_3651
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: TM1040_3652
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: TM1040_3653
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: TM1040_3654
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: TM1040_3655
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: TM1040_3656
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: TM1040_3657
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: TM1040_3658
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
||||
| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA-thiZ-thiX | -146 | 79.4 | GCGAACCGTTGGGGT... | TM1040_3649 |
| Silicibacter pomeroyi DSS-3 | ||||
|
Position: -148
Score: 78.18 Sequence: GCCAACCGTTGGGGT...
Locus tag: SPO0045
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: SPO0046
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: SPO0046.1
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: SPO0047
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: SPO0048
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: SPO0049
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: SPO0050
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: SPO0051
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: SPO0052
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: SPO0053
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
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| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA-thiZ-thiX | -148 | 78.2 | GCCAACCGTTGGGGT... | SPO0045 |
| Sulfitobacter sp. EE-36 | ||||
|
Position: -169
Score: 79.57 Sequence: CATCTATCCGTCGGG...
Locus tag: EE36_13848
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: EE36_13843
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: EE36_13838
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: EE36_13833
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: EE36_13828
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: EE36_13823
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: EE36_13818
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: EE36_13813
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: EE36_13808
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: EE36_13803
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
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| thiD-thiO-thiS-thiG-thiE-thiF-thiY-tenA-thiZ-thiX | -169 | 79.6 | CATCTATCCGTCGGG... | EE36_13848 |