Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsO gene

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -60
Score: 14.14
Sequence: TGGGCCTTGCTGGAC...
Locus tag: Jann_4030
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 14.1 TGGGCCTTGCTGGAC... Jann_4030
Loktanella vestfoldensis SKA53
Position: -60
Score: 21.5
Sequence: CGGGCCTTGCTGGAC...
Locus tag: SKA53_12563
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 21.5 CGGGCCTTGCTGGAC... SKA53_12563
Oceanicaulis alexandrii HTCC2633
Position: -75
Score: 16.92
Sequence: GCGATCGGCGAAGCA...
Locus tag: OA2633_10304
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -75 16.9 GCGATCGGCGAAGCA... OA2633_10304
Rhodobacter sphaeroides 2.4.1
Position: -56
Score: 20.94
Sequence: GGCCTTGCTGGACGA...
Locus tag: RSP_1111
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -56 20.9 GGCCTTGCTGGACGA... RSP_1111
Roseobacter sp. MED193
Position: -60
Score: 21.64
Sequence: GCCTGCGCTGGACGA...
Locus tag: MED193_13063
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 21.6 GCCTGCGCTGGACGA... MED193_13063
Roseovarius nubinhibens ISM
Position: -63
Score: 18.16
Sequence: AGGACCCTGCTGGAC...
Locus tag: ISM_06390
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -63 18.2 AGGACCCTGCTGGAC... ISM_06390
Roseovarius sp. 217
Position: -58
Score: 20.39
Sequence: GACCTTGCTGGACGA...
Locus tag: ROS217_09385
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -58 20.4 GACCTTGCTGGACGA... ROS217_09385
Silicibacter TM1040
Position: -63
Score: 15.27
Sequence: GGGCCTGCGCTGGAC...
Locus tag: TM1040_0081
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -63 15.3 GGGCCTGCGCTGGAC... TM1040_0081
Sulfitobacter sp. EE-36
Position: -62
Score: 19.96
Sequence: GCCTGTGCTGGACGA...
Locus tag: EE36_05853
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 20 GCCTGTGCTGGACGA... EE36_05853