Orthologous regulated operons containing cobC gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Burkholderia glumae BGR1 | ||||
|
Position: -344
Score: 17.28 Sequence: CTTCGGTGCATGCGT...
Locus tag: bglu_1g28210
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: bglu_1g28200
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: bglu_1g28190
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: bglu_1g28180
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: bglu_1g28170
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-cobT-cobS-cobC | -344 | 17.3 | CTTCGGTGCATGCGT... | bglu_1g28210 |
| Burkholderia mallei ATCC 23344 | ||||
|
Position: -336
Score: 17.71 Sequence: TAAACTGGCGCCGCC...
Locus tag: BMA0685
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BMA0686
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: BMA0687
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: BMA0688
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: BMA0689
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: BMA0690
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-cobT-cobS-cobC | -336 | 17.7 | TAAACTGGCGCCGCC... | BMA0685 |
| Burkholderia phymatum STM815 | ||||
|
Position: -319
Score: 41.55 Sequence: TCTACACTTGCGGCA...
Locus tag: Bphy_2213
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Bphy_2212
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bphy_2211
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bphy_2210
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bphy_2209
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bphy_2208
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuB-btuC-btuD-cobT-cobS-cobC | -319 | 41.5 | TCTACACTTGCGGCA... | Bphy_2213 |
| Burkholderia pseudomallei K96243 | ||||
|
Position: -335
Score: 17.71 Sequence: TAAACTGGCGCCGCC...
Locus tag: BPSL0976
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: BPSL0977
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: BPSL0978
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: BPSL0979
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: BPSL0980
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: BPSL0981
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
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| btuB-btuC-btuD-cobT-cobS-cobC | -335 | 17.7 | TAAACTGGCGCCGCC... | BPSL0976 |
| Burkholderia sp. 383 | ||||
|
Position: -411
Score: 15.85 Sequence: CCTAAACTGGCGCCG...
Locus tag: Bcep18194_A5786
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bcep18194_A5785
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bcep18194_A5784
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bcep18194_A5783
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bcep18194_A5782
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
||||
| btuC-btuD-cobT-cobS-cobC | -411 | 15.9 | CCTAAACTGGCGCCG... | Bcep18194_A5786 |
| Burkholderia vietnamiensis G4 | ||||
|
Position: -736
Score: 29.76 Sequence: CCTAAACTGGCGCGG...
Locus tag: Bcep1808_2539
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bcep1808_2538
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bcep1808_2537
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bcep1808_2536
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bcep1808_2535
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
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| btuC-btuD-cobT-cobS-cobC | -736 | 29.8 | CCTAAACTGGCGCGG... | Bcep1808_2539 |
| Burkholderia xenovorans LB400 | ||||
|
Position: -346
Score: 58.49 Sequence: TACACTGGCCGCACT...
Locus tag: Bxe_A3502
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Bxe_A3501
Name: btuC Funciton: ABC-type cobalamin transport system, permease component
Locus tag: Bxe_A3500
Name: btuD Funciton: ABC-type cobalamin transport system, ATPase components
Locus tag: Bxe_A3499
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Bxe_A3498
Name: cobS Funciton: Cobalamin-5-phosphate synthase CobS
Locus tag: Bxe_A3497
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) |
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| btuB-btuC-btuD-cobT-cobS-cobC | -346 | 58.5 | TACACTGGCCGCACT... | Bxe_A3502 |