Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvH gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Hyphomonas neptunium ATCC 15444
Position: -238
Score: 60.61
Sequence: ATTCTCTTCCGGGAG...
Position: -150
Score: 50.43
Sequence: ATCAACACGCTGGAA...
Locus tag: HNE_2719
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: HNE_2720
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: HNE_2721
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: HNE_2722
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP-gcvP -238 60.6 ATTCTCTTCCGGGAG... HNE_2719
-150 50.4 ATCAACACGCTGGAA...
Jannaschia sp. CCS1
Position: -250
Score: 41.34
Sequence: CGCAACCGTAGGGAG...
Position: -148
Score: 43.93
Sequence: GACATAACTCTGGAG...
Locus tag: Jann_3620
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Jann_3621
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Jann_3622
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -250 41.3 CGCAACCGTAGGGAG... Jann_3620
-148 43.9 GACATAACTCTGGAG...
Oceanicaulis alexandrii HTCC2633
Position: -266
Score: 57.35
Sequence: GGTCACTTGCGGGAG...
Position: -177
Score: 42.23
Sequence: GACCTAACGCTGGAA...
Locus tag: OA2633_14096
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: OA2633_14101
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: OA2633_14106
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: OA2633_14111
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP-gcvP -266 57.3 GGTCACTTGCGGGAG... OA2633_14096
-177 42.2 GACCTAACGCTGGAA...
Oceanicola batsensis HTCC2597
Position: -219
Score: 38.46
Sequence: ACATCGGACAGGGAG...
Position: -127
Score: 33.36
Sequence: TCTGGAGAGTGGCGC...
Locus tag: OB2597_14831
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: OB2597_14836
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: OB2597_14841
Name: null
Funciton: glycine dehydrogenase
Locus tag: OB2597_14846
Name: RB2654_18573
Funciton: Uncharacterized conserved protein
Locus tag: OB2597_14851
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-OB2597_14841-RB2654_18573-gcvP -219 38.5 ACATCGGACAGGGAG... OB2597_14831
-127 33.4 TCTGGAGAGTGGCGC...
Paracoccus denitrificans PD1222
Position: -223
Score: 57.57
Sequence: AGGTCGGAAATCGGG...
Position: -130
Score: 23.21
Sequence: GCTCTGGAGAGAGGC...
Locus tag: Pden_2348
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Pden_2347
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Pden_2346
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -223 57.6 AGGTCGGAAATCGGG... Pden_2348
-130 23.2 GCTCTGGAGAGAGGC...
Rhodobacter sphaeroides 2.4.1
Position: -229
Score: 48.94
Sequence: GCCACAGGATCGGGA...
Position: -141
Score: 35.39
Sequence: TCGAAGACTCTGGAG...
Locus tag: RSP_2193
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RSP_2194
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: RSP_2195
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -229 48.9 GCCACAGGATCGGGA... RSP_2193
-141 35.4 TCGAAGACTCTGGAG...
Rhodobacterales bacterium HTCC2654
Position: -240
Score: 39.12
Sequence: CCGCATCCACGTTGG...
Position: -144
Score: 44.05
Sequence: ACGACAGCACTCTGG...
Locus tag: RB2654_18583
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: RB2654_18578
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: RB2654_18573
Name: RB2654_18573
Funciton: Uncharacterized conserved protein
Locus tag: RB2654_18568
Name: null
Funciton: Lactoylglutathione lyase and related lyases
Locus tag: RB2654_18563
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-RB2654_18573-RB2654_18568-gcvP -240 39.1 CCGCATCCACGTTGG... RB2654_18583
-144 44 ACGACAGCACTCTGG...
Roseobacter sp. MED193
Position: -348
Score: 32.74
Sequence: CCCTGTGTATATGGG...
Position: -235
Score: 42.23
Sequence: CACGAAAGACTCTGG...
Locus tag: MED193_09370
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: MED193_09365
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvH-gcvP -348 32.7 CCCTGTGTATATGGG... MED193_09370
-235 42.2 CACGAAAGACTCTGG...
Roseovarius nubinhibens ISM
Position: -257
Score: 49.63
Sequence: AGATATCGAAACGGG...
Position: -173
Score: 42.16
Sequence: ATCGAGGAACTCTGG...
Locus tag: ISM_05735
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: ISM_05730
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: ISM_05725
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -257 49.6 AGATATCGAAACGGG... ISM_05735
-173 42.2 ATCGAGGAACTCTGG...
Roseovarius sp. 217
Position: -268
Score: 43.69
Sequence: AGATCGGATAGGGAG...
Position: -185
Score: 41.68
Sequence: CACGGAACTCTGGAG...
Locus tag: ROS217_16241
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: ROS217_16246
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: ROS217_16251
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -268 43.7 AGATCGGATAGGGAG... ROS217_16241
-185 41.7 CACGGAACTCTGGAG...
Silicibacter TM1040
Position: -293
Score: 42.56
Sequence: GCCGCAGCACATGGG...
Position: -191
Score: 47.98
Sequence: GCGTAACTACTCTGG...
Locus tag: TM1040_2393
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: TM1040_2392
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: TM1040_2391
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -293 42.6 GCCGCAGCACATGGG... TM1040_2393
-191 48 GCGTAACTACTCTGG...
Sulfitobacter sp. EE-36
Position: -239
Score: 45.19
Sequence: ACACCGTTACGGGAG...
Position: -154
Score: 48.73
Sequence: CTAACAACTCTGGAG...
Locus tag: EE36_09003
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: EE36_09008
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: EE36_09013
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -239 45.2 ACACCGTTACGGGAG... EE36_09003
-154 48.7 CTAACAACTCTGGAG...
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