Orthologous regulated operons containing cobN gene
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Jannaschia sp. CCS1 | ||||
|
Position: -221
Score: 141.54 Sequence: TGAACAGGGTCACGG...
Locus tag: Jann_2934
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: Jann_2933
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Jann_2932
Name: engA Funciton: hypothetical protein
Locus tag: Jann_2931
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Jann_2930
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Jann_2929
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Jann_2928
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Jann_2927
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-engA-cobN-cobG-cbiC-cbiL-cbiH | -221 | 141.5 | TGAACAGGGTCACGG... | Jann_2934 |
| Oceanicola batsensis HTCC2597 | ||||
|
Position: -244
Score: 106.7 Sequence: GCACAACCGAAAGGC...
Locus tag: OB2597_10304
Name: cbtC Funciton: Predicted cobalt transporter CbtC
Locus tag: OB2597_10309
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: OB2597_10314
Name: RSP_2081 Funciton: Histone acetyltransferase HPA2 and related acetyltransferases
Locus tag: OB2597_10319
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis |
||||
| cbtC-cobW-RSP_2081-cobN | -244 | 106.7 | GCACAACCGAAAGGC... | OB2597_10304 |
| Paracoccus denitrificans PD1222 | ||||
|
Position: -277
Score: 85.19 Sequence: CACAGACATGGGGCG...
Locus tag: Pden_2530
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: Pden_2531
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Pden_2532
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Pden_2533
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Pden_2534
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Pden_2535
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Pden_2536
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cobG-cbiC-cbiL-cbiH | -277 | 85.2 | CACAGACATGGGGCG... | Pden_2530 |
| Rhodobacter sphaeroides 2.4.1 | ||||
|
Position: -292
Score: 75.63 Sequence: ACCACTTCCGGCGCG...
Locus tag: RSP_2829
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: RSP_2828
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: RSP_2827
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: RSP_6217
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: RSP_2826
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: RSP_2824
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cbiC-cbiL-cbiH | -292 | 75.6 | ACCACTTCCGGCGCG... | RSP_2829 |
| Roseobacter sp. MED193 | ||||
|
Position: -216
Score: 93.53 Sequence: GCGCAAGGGGGTTTT...
Locus tag: MED193_19614
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: MED193_19609
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: MED193_19604
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: MED193_19599
Name: null Funciton: Cobalamin biosynthesis protein CobG
Locus tag: MED193_19594
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: MED193_19589
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: MED193_19584
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-MED193_19599-cbiC-cbiL-cbiH | -216 | 93.5 | GCGCAAGGGGGTTTT... | MED193_19614 |
| Roseovarius nubinhibens ISM | ||||
|
Position: -321
Score: 127.99 Sequence: GCATTGTCGCCCCTG...
Locus tag: ISM_12600
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: ISM_12605
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: ISM_12610
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: ISM_12615
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: ISM_12620
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: ISM_12625
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: ISM_12630
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cobG-cbiC-cbiL-cbiH | -321 | 128 | GCATTGTCGCCCCTG... | ISM_12600 |
| Silicibacter TM1040 | ||||
|
Position: -336
Score: 77.76 Sequence: CGCAAGGAAATTTCG...
Locus tag: TM1040_2208
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: TM1040_2209
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: TM1040_2210
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: TM1040_2211
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: TM1040_2212
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: TM1040_2213
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: TM1040_2214
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cobG-cbiC-cbiL-cbiH | -336 | 77.8 | CGCAAGGAAATTTCG... | TM1040_2208 |
| Silicibacter pomeroyi DSS-3 | ||||
|
Position: -292
Score: 81.78 Sequence: CGCATGTCCGCCCTG...
Locus tag: SPO2861
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: SPO2862
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: SPO2863
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: SPO2864
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: SPO2865
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: SPO2866
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: SPO2867
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cobG-cbiC-cbiL-cbiH | -292 | 81.8 | CGCATGTCCGCCCTG... | SPO2861 |
| Sulfitobacter sp. EE-36 | ||||
|
Position: -311
Score: 88.94 Sequence: AATGCAGGGCGTATG...
Locus tag: EE36_05358
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: EE36_05363
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: EE36_05368
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: EE36_05373
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: EE36_05378
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: EE36_05383
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: EE36_05388
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
||||
| cfrX-cobW-cobN-cobG-cbiC-cbiL-cbiH | -311 | 88.9 | AATGCAGGGCGTATG... | EE36_05358 |