Orthologous regulated operons containing PF04020 gene
| Regulator type: | RNA regulatory element |
| Name: | SAH_riboswitch |
| RFAM: | RF01057 |
| Regulation mode: | |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Burkholderia cepacia AMMD | ||||
|
Position: -149
Score: 46.98 Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bamb_0186
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bamb_0187
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: Bamb_0188
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -149 | 47 | TTTCCGAGGAGCGTT... | Bamb_0186 |
| Burkholderia glumae BGR1 | ||||
|
Position: -169
Score: 45.68 Sequence: TTTCCGAGGAGCGTT...
Locus tag: bglu_1g01990
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: bglu_1g02000
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: bglu_1g02010
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -169 | 45.7 | TTTCCGAGGAGCGTT... | bglu_1g01990 |
| Burkholderia mallei ATCC 23344 | ||||
|
Position: -175
Score: 46.45 Sequence: CGTTTCCGAGGAGCG...
Locus tag: BMA2842
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: BMA2841
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: BMA2840
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -175 | 46.5 | CGTTTCCGAGGAGCG... | BMA2842 |
| Burkholderia phymatum STM815 | ||||
|
Position: -146
Score: 41.6 Sequence: GTCTTCGAGGAGCGT...
Locus tag: Bphy_2918
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bphy_2917
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: Bphy_2916
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -146 | 41.6 | GTCTTCGAGGAGCGT... | Bphy_2918 |
| Burkholderia pseudomallei K96243 | ||||
|
Position: -175
Score: 46.45 Sequence: CGTTTCCGAGGAGCG...
Locus tag: BPSL3290
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: BPSL3289
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: BPSL3288
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -175 | 46.5 | CGTTTCCGAGGAGCG... | BPSL3290 |
| Burkholderia sp. 383 | ||||
|
Position: -148
Score: 43.8 Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bcep18194_A3375
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bcep18194_A3376
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: Bcep18194_A3377
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -148 | 43.8 | TTTCCGAGGAGCGTT... | Bcep18194_A3375 |
| Burkholderia vietnamiensis G4 | ||||
|
Position: -149
Score: 46.66 Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bcep1808_0232
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bcep1808_0233
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: Bcep1808_0234
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
||||
| ahcY-PF04020-metF | -149 | 46.7 | TTTCCGAGGAGCGTT... | Bcep1808_0232 |
| Burkholderia xenovorans LB400 | ||||
|
Position: -171
Score: 36.6 Sequence: CGTCTTCGAGGAGCG...
Locus tag: Bxe_A0178
Name: ahcY Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bxe_A0179
Name: PF04020 Funciton: Predicted membrane protein
Locus tag: Bxe_A0180
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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| ahcY-PF04020-metF | -171 | 36.6 | CGTCTTCGAGGAGCG... | Bxe_A0178 |