Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF04020 gene

Properties
Regulator type: RNA regulatory element
Name: SAH_riboswitch
RFAM: RF01057
Regulation mode:
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -149
Score: 46.98
Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bamb_0186
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bamb_0187
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Bamb_0188
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -149 47 TTTCCGAGGAGCGTT... Bamb_0186
Burkholderia glumae BGR1
Position: -169
Score: 45.68
Sequence: TTTCCGAGGAGCGTT...
Locus tag: bglu_1g01990
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: bglu_1g02000
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: bglu_1g02010
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -169 45.7 TTTCCGAGGAGCGTT... bglu_1g01990
Burkholderia mallei ATCC 23344
Position: -175
Score: 46.45
Sequence: CGTTTCCGAGGAGCG...
Locus tag: BMA2842
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: BMA2841
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: BMA2840
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -175 46.5 CGTTTCCGAGGAGCG... BMA2842
Burkholderia phymatum STM815
Position: -146
Score: 41.6
Sequence: GTCTTCGAGGAGCGT...
Locus tag: Bphy_2918
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bphy_2917
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Bphy_2916
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -146 41.6 GTCTTCGAGGAGCGT... Bphy_2918
Burkholderia pseudomallei K96243
Position: -175
Score: 46.45
Sequence: CGTTTCCGAGGAGCG...
Locus tag: BPSL3290
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: BPSL3289
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: BPSL3288
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -175 46.5 CGTTTCCGAGGAGCG... BPSL3290
Burkholderia sp. 383
Position: -148
Score: 43.8
Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bcep18194_A3375
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bcep18194_A3376
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Bcep18194_A3377
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -148 43.8 TTTCCGAGGAGCGTT... Bcep18194_A3375
Burkholderia vietnamiensis G4
Position: -149
Score: 46.66
Sequence: TTTCCGAGGAGCGTT...
Locus tag: Bcep1808_0232
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bcep1808_0233
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Bcep1808_0234
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -149 46.7 TTTCCGAGGAGCGTT... Bcep1808_0232
Burkholderia xenovorans LB400
Position: -171
Score: 36.6
Sequence: CGTCTTCGAGGAGCG...
Locus tag: Bxe_A0178
Name: ahcY
Funciton: Adenosylhomocysteinase (EC 3.3.1.1)
Locus tag: Bxe_A0179
Name: PF04020
Funciton: Predicted membrane protein
Locus tag: Bxe_A0180
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
ahcY-PF04020-metF -171 36.6 CGTCTTCGAGGAGCG... Bxe_A0178
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