Orthologous regulated operons containing sdaA gene
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Burkholderia cepacia AMMD | ||||
|
Position: -355
Score: 35.09 Sequence: CCCGCACGCGTCGGG...
Position: -219
Score: 29.59 Sequence: CTCCCCGCACTCTGG...
Locus tag: Bamb_0133
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bamb_0132
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Bamb_0131
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bamb_0130
Name: null Funciton: hypothetical protein
Locus tag: Bamb_0129
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-Bamb_0130-sdaA | -355 | 35.1 | CCCGCACGCGTCGGG... | Bamb_0133 |
| -219 | 29.6 | CTCCCCGCACTCTGG... | ||
| Burkholderia glumae BGR1 | ||||
|
Position: -352
Score: 43.31 Sequence: CCGGCACGCGTCGGG...
Position: -216
Score: 30.35 Sequence: GAGTTCGGACTCTGG...
Locus tag: bglu_1g01030
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: bglu_1g01020
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: bglu_1g01010
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: bglu_1g01000
Name: null Funciton: hypothetical protein
Locus tag: bglu_1g00990
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-bglu_1g01000-sdaA | -352 | 43.3 | CCGGCACGCGTCGGG... | bglu_1g01030 |
| -216 | 30.4 | GAGTTCGGACTCTGG... | ||
| Burkholderia mallei ATCC 23344 | ||||
|
Position: -377
Score: 37.49 Sequence: TCCGCACGCGTCGGG...
Position: -235
Score: 29.75 Sequence: TTTTTCGCACTCTGG...
Locus tag: BMA2994.1
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BMA2994
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: BMA2993
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: BMA2992
Name: null Funciton: hypothetical protein
Locus tag: BMA2991
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-BMA2992-sdaA | -377 | 37.5 | TCCGCACGCGTCGGG... | BMA2994.1 |
| -235 | 29.8 | TTTTTCGCACTCTGG... | ||
| Burkholderia sp. 383 | ||||
|
Position: -356
Score: 41.67 Sequence: CCCGCACGCGTCGGG...
Locus tag: Bcep18194_A3325
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bcep18194_A3324
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Bcep18194_A3323
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bcep18194_A3322
Name: null Funciton: hypothetical protein
Locus tag: Bcep18194_A3321
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-Bcep18194_A3322-sdaA | -356 | 41.7 | CCCGCACGCGTCGGG... | Bcep18194_A3325 |
| Burkholderia vietnamiensis G4 | ||||
|
Position: -355
Score: 38.51 Sequence: CCCGCACGCGTCGGG...
Locus tag: Bcep1808_0151
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bcep1808_0150
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Bcep1808_0149
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bcep1808_0148
Name: null Funciton: hypothetical protein
Locus tag: Bcep1808_0147
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-Bcep1808_0148-sdaA | -355 | 38.5 | CCCGCACGCGTCGGG... | Bcep1808_0151 |
| Burkholderia xenovorans LB400 | ||||
|
Position: -330
Score: 38.73 Sequence: CGTACGCGTCGGGAG...
Position: -195
Score: 37.85 Sequence: TTTCGCACTCTGGAG...
Locus tag: Bxe_A0056
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bxe_A0055
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: Bxe_A0054
Name: gcvP Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bxe_A0053
Name: null Funciton: hypothetical protein
Locus tag: Bxe_A0052
Name: sdaA Funciton: L-serine dehydratase (EC 4.3.1.17) |
||||
| gcvT-gcvH-gcvP-Bxe_A0053-sdaA | -330 | 38.7 | CGTACGCGTCGGGAG... | Bxe_A0056 |
| -195 | 37.8 | TTTCGCACTCTGGAG... | ||