Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gcvP gene

Properties
Regulator type: RNA regulatory element
Name: Glycine
RFAM: RF00504
Regulation mode:
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -355
Score: 35.09
Sequence: CCCGCACGCGTCGGG...
Position: -219
Score: 29.59
Sequence: CTCCCCGCACTCTGG...
Locus tag: Bamb_0133
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bamb_0132
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bamb_0131
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bamb_0130
Name: null
Funciton: hypothetical protein
Locus tag: Bamb_0129
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-Bamb_0130-sdaA -355 35.1 CCCGCACGCGTCGGG... Bamb_0133
-219 29.6 CTCCCCGCACTCTGG...
Burkholderia glumae BGR1
Position: -352
Score: 43.31
Sequence: CCGGCACGCGTCGGG...
Position: -216
Score: 30.35
Sequence: GAGTTCGGACTCTGG...
Locus tag: bglu_1g01030
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: bglu_1g01020
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: bglu_1g01010
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: bglu_1g01000
Name: null
Funciton: hypothetical protein
Locus tag: bglu_1g00990
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-bglu_1g01000-sdaA -352 43.3 CCGGCACGCGTCGGG... bglu_1g01030
-216 30.4 GAGTTCGGACTCTGG...
Burkholderia mallei ATCC 23344
Position: -377
Score: 37.49
Sequence: TCCGCACGCGTCGGG...
Position: -235
Score: 29.75
Sequence: TTTTTCGCACTCTGG...
Locus tag: BMA2994.1
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: BMA2994
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: BMA2993
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: BMA2992
Name: null
Funciton: hypothetical protein
Locus tag: BMA2991
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-BMA2992-sdaA -377 37.5 TCCGCACGCGTCGGG... BMA2994.1
-235 29.8 TTTTTCGCACTCTGG...
Burkholderia phymatum STM815
Position: -380
Score: 44.29
Sequence: CGCACGCGTCGGGAG...
Position: -221
Score: 33.14
Sequence: TTTCGCACTCTGGAG...
Locus tag: Bphy_3003
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bphy_3004
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bphy_3005
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
gcvT-gcvH-gcvP -380 44.3 CGCACGCGTCGGGAG... Bphy_3003
-221 33.1 TTTCGCACTCTGGAG...
Burkholderia sp. 383
Position: -356
Score: 41.67
Sequence: CCCGCACGCGTCGGG...
Locus tag: Bcep18194_A3325
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bcep18194_A3324
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bcep18194_A3323
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bcep18194_A3322
Name: null
Funciton: hypothetical protein
Locus tag: Bcep18194_A3321
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-Bcep18194_A3322-sdaA -356 41.7 CCCGCACGCGTCGGG... Bcep18194_A3325
Burkholderia vietnamiensis G4
Position: -355
Score: 38.51
Sequence: CCCGCACGCGTCGGG...
Locus tag: Bcep1808_0151
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bcep1808_0150
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bcep1808_0149
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bcep1808_0148
Name: null
Funciton: hypothetical protein
Locus tag: Bcep1808_0147
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-Bcep1808_0148-sdaA -355 38.5 CCCGCACGCGTCGGG... Bcep1808_0151
Burkholderia xenovorans LB400
Position: -330
Score: 38.73
Sequence: CGTACGCGTCGGGAG...
Position: -195
Score: 37.85
Sequence: TTTCGCACTCTGGAG...
Locus tag: Bxe_A0056
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Bxe_A0055
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Bxe_A0054
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Locus tag: Bxe_A0053
Name: null
Funciton: hypothetical protein
Locus tag: Bxe_A0052
Name: sdaA
Funciton: L-serine dehydratase (EC 4.3.1.17)
gcvT-gcvH-gcvP-Bxe_A0053-sdaA -330 38.7 CGTACGCGTCGGGAG... Bxe_A0056
-195 37.8 TTTCGCACTCTGGAG...
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