Orthologous regulated operons containing ccmD gene
Regulog: | NarP - Pasteurellales |
Regulator type: | Transcription factor |
Regulator family: | LuxR |
Regulation mode: | activator (repressor) |
Biological process: | Nitrate and nitrite respiration |
Effector: | Nitrite; Nitrate |
Phylum: | Proteobacteria |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Actinobacillus pleuropneumoniae serovar 7 str. AP76 | ||||
Position: -85
Score: 4.82002 Sequence: TACCTCTAAAGAGGTA
Locus tag: APP7_1423
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: APP7_1422
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: APP7_1421
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: APP7_1420
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: APP7_1419
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: APP7_1418
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF | -85 | 4.8 | TACCTCTAAAGAGGTA | APP7_1423 |
Actinobacillus succinogenes 130Z | ||||
Position: -93
Score: 4.76241 Sequence: TACCTCTAAATGGTTA
Locus tag: Asuc_0843
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: Asuc_0844
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: Asuc_0845
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: Asuc_0846
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: Asuc_0847
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: Asuc_0848
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: Asuc_0849
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: Asuc_0850
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: Asuc_0851
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -93 | 4.8 | TACCTCTAAATGGTTA | Asuc_0843 |
Aggregatibacter aphrophilus NJ8700 | ||||
Position: -101
Score: 4.108 Sequence: TACTGCTAAAGAGTTA
Locus tag: NT05HA_0026
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: NT05HA_0027
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: NT05HA_0028
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: NT05HA_0029
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: NT05HA_0030
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: NT05HA_0031
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: NT05HA_0032
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: NT05HA_0033
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: NT05HA_0034
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -101 | 4.1 | TACTGCTAAAGAGTTA | NT05HA_0026 |
Haemophilus ducreyi 35000HP | ||||
Position: -85
Score: 4.51143 Sequence: TACCTCTAAAGAAGTA
Locus tag: HD0786
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HD0787
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HD0789
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HD0790
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
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ccmA-ccmB-ccmC-ccmD | -85 | 4.5 | TACCTCTAAAGAAGTA | HD0786 |
Haemophilus influenzae Rd KW20 | ||||
Position: -84
Score: 4.61461 Sequence: TACTTCTAAAGAGTTA
Locus tag: HI1089
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HI1090
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HI1091
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HI1092
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HI1093
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HI1094
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HI1095
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HI1096m
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HI1097m
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -84 | 4.6 | TACTTCTAAAGAGTTA | HI1089 |
Haemophilus somnus 2336 | ||||
Position: -96
Score: 3.80085 Sequence: TACAACTAAAGAGTTA
Locus tag: HSM_0718
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HSM_0719
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HSM_0720
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HSM_0721
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HSM_0722
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HSM_0723
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HSM_0724
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HSM_0725
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HSM_0726
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -96 | 3.8 | TACAACTAAAGAGTTA | HSM_0718 |
Mannheimia succiniciproducens MBEL55E | ||||
Position: -103
Score: 4.12755 Sequence: CACCTCTAAAGAGGTA
Locus tag: MS0601
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: MS0602
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: MS0603
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: MS0604
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: MS0605
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: MS0606
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: MS0607
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: MS0608
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: MS0609
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -103 | 4.1 | CACCTCTAAAGAGGTA | MS0601 |
Pasteurella multocida subsp. multocida str. Pm70 | ||||
Position: -98
Score: 4.12755 Sequence: CACCTCTAAAGAGGTA
Locus tag: PM0005
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: PM0006
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: PM0007
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: PM0008
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: PM0009
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: PM0010
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: PM0011
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: PM0012
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: PM0013
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -98 | 4.1 | CACCTCTAAAGAGGTA | PM0005 |