Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ykoY gene

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -228
Score: 54.5
Sequence: TGCCCCTGTTTGGGG...
Locus tag: PBPRA2002
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -228 54.5 TGCCCCTGTTTGGGG... PBPRA2002
Vibrio angustum S14
Position: -381
Score: 51.6
Sequence: ATCGCCTTGTTTTGG...
Locus tag: VAS14_02281
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -381 51.6 ATCGCCTTGTTTTGG... VAS14_02281
Vibrio cholerae O1 biovar eltor str. N16961
Position: -209
Score: 49.21
Sequence: GGCGACGTTTTGGGG...
Locus tag: VCA0546
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -209 49.2 GGCGACGTTTTGGGG... VCA0546
Vibrio fischeri ES114
Position: -216
Score: 49.64
Sequence: TATCCAGATCATTGG...
Locus tag: VF_A0278
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -216 49.6 TATCCAGATCATTGG... VF_A0278
Vibrio harveyi ATCC BAA-1116
Position: -209
Score: 43.32
Sequence: TGATGGCGGCGTTTG...
Locus tag: VIBHAR_05912
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -209 43.3 TGATGGCGGCGTTTG... VIBHAR_05912
Vibrio parahaemolyticus RIMD 2210633
Position: -285
Score: 47.05
Sequence: ATGGCGGCGTTTGGG...
Locus tag: VPA0856
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -285 47 ATGGCGGCGTTTGGG... VPA0856
Vibrio salmonicida LFI1238
Position: -218
Score: 55.93
Sequence: CTATCCGAGTCTTGG...
Locus tag: VSAL_II1094
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -218 55.9 CTATCCGAGTCTTGG... VSAL_II1094
Vibrio shilonii AK1
Position: -196
Score: 56.23
Sequence: CCGCTCGTTTTGGGG...
Locus tag: VSAK1_14500
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -196 56.2 CCGCTCGTTTTGGGG... VSAK1_14500
Vibrio splendidus LGP32
Position: -155
Score: 49.59
Sequence: TTATCCACGCGTTTG...
Locus tag: VS_II0779
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -155 49.6 TTATCCACGCGTTTG... VS_II0779
Vibrio vulnificus CMCP6
Position: -304
Score: 39.26
Sequence: ATCGAACGTTTGGGG...
Locus tag: VV20239
Name: ykoY
Funciton: Integral membrane protein TerC
ykoY -304 39.3 ATCGAACGTTTGGGG... VV20239