Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing trpB gene

Properties
Regulator type: RNA regulatory element
Name: Trp_leader
RFAM: RF00513
Regulation mode:
Biological process: Tryptophan biosynthesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -174
Score: 42.48
Sequence: TCTCATGGTGGTGGC...
Locus tag: PBPRA2485
Name: aroF2
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: PBPRA2486
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: PBPRA2487
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: PBPRA2488
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: PBPRA2489
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: PBPRA2490
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: PBPRA2491
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
aroF2-trpE-trpG-trpD-trpC-trpB-trpA -174 42.5 TCTCATGGTGGTGGC... PBPRA2485
Vibrio angustum S14
Position: -174
Score: 55.5
Sequence: CAATAATTGGTGGTG...
Locus tag: VAS14_18374
Name: aroF2
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: VAS14_18369
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VAS14_18364
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VAS14_18359
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VAS14_18354
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VAS14_18349
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VAS14_18344
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
aroF2-trpE-trpG-trpD-trpC-trpB-trpA -174 55.5 CAATAATTGGTGGTG... VAS14_18374
Vibrio cholerae O1 biovar eltor str. N16961
Position: -188
Score: 77.08
Sequence: ACTGGCTTGGTGGCG...
Locus tag: VC1174
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VC1173
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VC1172
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VC1171
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VC1170
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VC1169
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -188 77.1 ACTGGCTTGGTGGCG... VC1174
Vibrio fischeri ES114
Position: -226
Score: 23.11
Sequence: TCACGATGGTGGCAC...
Locus tag: VF_2602
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1033
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1032
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VF_1031
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VF_1029
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VF_1028
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VF_1027
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpE-trpG-trpD-trpC-trpB-trpA -226 23.1 TCACGATGGTGGCAC... VF_2602
Vibrio harveyi ATCC BAA-1116
Position: -228
Score: 67.32
Sequence: TTGCTTGGTGGCGCA...
Locus tag: VIBHAR_02758
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VIBHAR_02759
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VIBHAR_02760
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VIBHAR_02761
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VIBHAR_02762
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VIBHAR_02763
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -228 67.3 TTGCTTGGTGGCGCA... VIBHAR_02758
Vibrio parahaemolyticus RIMD 2210633
Position: -228
Score: 74.22
Sequence: TTGCTTGGTGGCGCA...
Locus tag: VP1956
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VP1957
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VP1958
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VP1959
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VP1960
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VP1961
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -228 74.2 TTGCTTGGTGGCGCA... VP1956
Vibrio salmonicida LFI1238
Position: -213
Score: 35.05
Sequence: TCAACGTTGGTGGCA...
Locus tag: VSAL_I1154
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAL_I1153
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAL_I1152
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAL_I1151
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAL_I1150
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAL_I1149
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -213 35 TCAACGTTGGTGGCA... VSAL_I1154
Vibrio shilonii AK1
Position: -230
Score: 45.79
Sequence: ACAAGGTTGGTGGCG...
Locus tag: VSAK1_01022
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAK1_01017
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAK1_01012
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAK1_01007
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAK1_01002
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAK1_00997
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -230 45.8 ACAAGGTTGGTGGCG... VSAK1_01022
Vibrio splendidus LGP32
Position: -191
Score: 67.4
Sequence: TTAATTGGTGGCGCA...
Locus tag: VS_1966
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VS_1967
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VS_1968
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VS_1969
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VS_1970
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VS_1971
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -191 67.4 TTAATTGGTGGCGCA... VS_1966
Vibrio vulnificus CMCP6
Position: -230
Score: 74.71
Sequence: TCGCTTGGTGGCGCA...
Locus tag: VV1_3064
Name: trpE
Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VV1_3065
Name: trpG
Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VV1_3066
Name: trpD
Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VV1_3067
Name: trpC
Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VV1_3068
Name: trpB
Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VV1_3069
Name: trpA
Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20)
trpE-trpG-trpD-trpC-trpB-trpA -230 74.7 TCGCTTGGTGGCGCA... VV1_3064
© 2009-2020 RegPrecise