Orthologous regulated operons containing trpC gene
| Regulator type: | RNA regulatory element |
| Name: | Trp_leader |
| RFAM: | RF00513 |
| Regulation mode: | |
| Biological process: | Tryptophan biosynthesis |
| Effector: | |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Photobacterium profundum SS9 | ||||
|
Position: -174
Score: 42.48 Sequence: TCTCATGGTGGTGGC...
Locus tag: PBPRA2485
Name: aroF2 Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: PBPRA2486
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: PBPRA2487
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: PBPRA2488
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: PBPRA2489
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: PBPRA2490
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: PBPRA2491
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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| aroF2-trpE-trpG-trpD-trpC-trpB-trpA | -174 | 42.5 | TCTCATGGTGGTGGC... | PBPRA2485 |
| Vibrio angustum S14 | ||||
|
Position: -174
Score: 55.5 Sequence: CAATAATTGGTGGTG...
Locus tag: VAS14_18374
Name: aroF2 Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: VAS14_18369
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VAS14_18364
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VAS14_18359
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VAS14_18354
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VAS14_18349
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VAS14_18344
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| aroF2-trpE-trpG-trpD-trpC-trpB-trpA | -174 | 55.5 | CAATAATTGGTGGTG... | VAS14_18374 |
| Vibrio cholerae O1 biovar eltor str. N16961 | ||||
|
Position: -188
Score: 77.08 Sequence: ACTGGCTTGGTGGCG...
Locus tag: VC1174
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VC1173
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VC1172
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VC1171
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VC1170
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VC1169
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -188 | 77.1 | ACTGGCTTGGTGGCG... | VC1174 |
| Vibrio fischeri ES114 | ||||
|
Position: -226
Score: 23.11 Sequence: TCACGATGGTGGCAC...
Locus tag: VF_2602
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1033
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VF_1032
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VF_1031
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VF_1029
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VF_1028
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VF_1027
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpE-trpG-trpD-trpC-trpB-trpA | -226 | 23.1 | TCACGATGGTGGCAC... | VF_2602 |
| Vibrio harveyi ATCC BAA-1116 | ||||
|
Position: -228
Score: 67.32 Sequence: TTGCTTGGTGGCGCA...
Locus tag: VIBHAR_02758
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VIBHAR_02759
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VIBHAR_02760
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VIBHAR_02761
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VIBHAR_02762
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VIBHAR_02763
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -228 | 67.3 | TTGCTTGGTGGCGCA... | VIBHAR_02758 |
| Vibrio parahaemolyticus RIMD 2210633 | ||||
|
Position: -228
Score: 74.22 Sequence: TTGCTTGGTGGCGCA...
Locus tag: VP1956
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VP1957
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VP1958
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VP1959
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VP1960
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VP1961
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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| trpE-trpG-trpD-trpC-trpB-trpA | -228 | 74.2 | TTGCTTGGTGGCGCA... | VP1956 |
| Vibrio salmonicida LFI1238 | ||||
|
Position: -213
Score: 35.05 Sequence: TCAACGTTGGTGGCA...
Locus tag: VSAL_I1154
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAL_I1153
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAL_I1152
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAL_I1151
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAL_I1150
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAL_I1149
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
||||
| trpE-trpG-trpD-trpC-trpB-trpA | -213 | 35 | TCAACGTTGGTGGCA... | VSAL_I1154 |
| Vibrio shilonii AK1 | ||||
|
Position: -230
Score: 45.79 Sequence: ACAAGGTTGGTGGCG...
Locus tag: VSAK1_01022
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VSAK1_01017
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VSAK1_01012
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VSAK1_01007
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VSAK1_01002
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VSAK1_00997
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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| trpE-trpG-trpD-trpC-trpB-trpA | -230 | 45.8 | ACAAGGTTGGTGGCG... | VSAK1_01022 |
| Vibrio splendidus LGP32 | ||||
|
Position: -191
Score: 67.4 Sequence: TTAATTGGTGGCGCA...
Locus tag: VS_1966
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VS_1967
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VS_1968
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VS_1969
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VS_1970
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VS_1971
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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| trpE-trpG-trpD-trpC-trpB-trpA | -191 | 67.4 | TTAATTGGTGGCGCA... | VS_1966 |
| Vibrio vulnificus CMCP6 | ||||
|
Position: -230
Score: 74.71 Sequence: TCGCTTGGTGGCGCA...
Locus tag: VV1_3064
Name: trpE Funciton: Anthranilate synthase, aminase component (EC 4.1.3.27)
Locus tag: VV1_3065
Name: trpG Funciton: Anthranilate synthase, amidotransferase component (EC 4.1.3.27)
Locus tag: VV1_3066
Name: trpD Funciton: Anthranilate phosphoribosyltransferase (EC 2.4.2.18)
Locus tag: VV1_3067
Name: trpC Funciton: Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
Locus tag: VV1_3068
Name: trpB Funciton: Tryptophan synthase beta chain (EC 4.2.1.20)
Locus tag: VV1_3069
Name: trpA Funciton: Tryptophan synthase alpha chain (EC 4.2.1.20) |
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| trpE-trpG-trpD-trpC-trpB-trpA | -230 | 74.7 | TCGCTTGGTGGCGCA... | VV1_3064 |