Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsO gene

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -68
Score: 42.0
Sequence: CCCGGCCTGCTGAAG...
Locus tag: Avin_42790
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -68 42 CCCGGCCTGCTGAAG... Avin_42790
Pseudomonas aeruginosa PAO1
Position: -65
Score: 50.4
Sequence: CGGTCATTCCTCCTT...
Locus tag: PA4741
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -65 50.4 CGGTCATTCCTCCTT... PA4741
Pseudomonas entomophila L48
Position: -40
Score: 50.41
Sequence: TGGACCCCGCTTGCG...
Locus tag: PSEEN0798
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -40 50.4 TGGACCCCGCTTGCG... PSEEN0798
Pseudomonas fluorescens Pf-5
Position: -45
Score: 50.77
Sequence: GTTGAAACTGTTCTT...
Locus tag: PFL_0847
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -45 50.8 GTTGAAACTGTTCTT... PFL_0847
Pseudomonas mendocina ymp
Position: -41
Score: 50.63
Sequence: TTGAGACTGCTGCGG...
Locus tag: Pmen_3605
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -41 50.6 TTGAGACTGCTGCGG... Pmen_3605
Pseudomonas putida KT2440
Position: -41
Score: 53.56
Sequence: ATTGGACCCCGCATG...
Locus tag: PP_4709
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -41 53.6 ATTGGACCCCGCATG... PP_4709
Pseudomonas stutzeri A1501
Position: -61
Score: 52.66
Sequence: GTCATGCCTCTTTAT...
Locus tag: PST_3307
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -61 52.7 GTCATGCCTCTTTAT... PST_3307
Pseudomonas syringae pv. tomato str. DC3000
Position: -53
Score: 45.21
Sequence: GCCTGTTGGAAACGT...
Locus tag: PSPTO4487
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -53 45.2 GCCTGTTGGAAACGT... PSPTO4487
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