Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing cbp gene

Properties
Regulator type: RNA regulatory element
Name: GEMM_RNA_motif
RFAM: RF01051
Regulation mode:
Biological process: Second messenger response
Effector: Cyclic diguanylate
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -155
Score: 59.16
Sequence: CACATTGTTGGCAAA...
Locus tag: PBPRB0312
Name: cbp
Funciton: Chitin binding protein
cbp -155 59.2 CACATTGTTGGCAAA... PBPRB0312
Vibrio cholerae O1 biovar eltor str. N16961
Position: -223
Score: 54.59
Sequence: TCACACTTTGGCAAA...
Locus tag: VCA0811
Name: cbp
Funciton: Chitin binding protein
cbp -223 54.6 TCACACTTTGGCAAA... VCA0811
Vibrio parahaemolyticus RIMD 2210633
Position: -204
Score: 51.49
Sequence: TCACATTTCGGCAAA...
Locus tag: VPA1598
Name: cbp
Funciton: Chitin binding protein
cbp -204 51.5 TCACATTTCGGCAAA... VPA1598
Vibrio vulnificus CMCP6
Position: -231
Score: 63.26
Sequence: CATCACACATAGGCA...
Locus tag: VV20044
Name: cbp
Funciton: Chitin binding protein
cbp -231 63.3 CATCACACATAGGCA... VV20044
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